Query= MSMg01no170_c21.b1 MSMg01no170_c21.b1 CHROMAT_FILE:
MSMg01no170_c21.b1 PHD_FILE: MSMg01no170_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:04 2005
(324 letters)
>mm_chr7_74290279_74291000
Length = 722
Score = 445 bits (230), Expect = e-129
Identities = 281/302 (93%), Gaps = 9/302 (2%)
Strand = Plus / Minus
Query: 5 gaattcaccccacaccaccaatgcagatttttaggtgctagccttaacctcaggatttcc 64
|||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 457 gaattcacgccacaccaccaatgcagatttttaggt----gccttaacctcaggagttcc 402
Query: 65 agggtacgtggatgtctgaagggtgccgaggtcatatgaggaagttcccactaagaggga 124
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 401 agggtacgtggatgtctgaagggtgccgaggtcatatgaggacgttcccattaacaggga 342
Query: 125 acccttgatcatggggcaggagctagagcaatgtagtttttagggttatagtgcaag--a 182
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 341 acccttgatcatggggcaggagctagagcaatgtagtttttagggttatattgcaagcca 282
Query: 183 agctaggattggctgcaagactaacccggtaagcattgaaaaaaatcctgatgtcccaac 242
| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 281 atttaggattggctgcaagactaacccggtaagctttgaaaaaaatcctgatatcccaac 222
Query: 243 ctctgcaaaaaaaaaaaaaatatatatatatatatatatatatatacatatatatatata 302
||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||
Sbjct: 221 ctctgcaaaaaaaaaaa---tatatatatatatatatatatatatatatatatgtatata 165
Query: 303 ta 304
||
Sbjct: 164 ta 163
Score = 70.3 bits (36), Expect = 2e-16
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 281 tatatatacatatatatatatatatatatatatata 316
||||||||||||||||||||||||||||||||||||
Sbjct: 163 tatatatacatatatatatatatatatatatatata 198
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 324
Length of database: 722
Length adjustment: 9
Effective length of query: 315
Effective length of database: 713
Effective search space: 224595
Effective search space used: 224595
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_c21.g1 MSMg01no170_c21.g1 CHROMAT_FILE:
MSMg01no170_c21.g1 PHD_FILE: MSMg01no170_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:04 2005
(295 letters)
>mm_chr7_74147390_74148084
Length = 695
Score = 532 bits (275), Expect = e-155
Identities = 290/295 (98%)
Strand = Plus / Plus
Query: 1 tcatctcaatgcagagcatcctatgatggaccaagccctctttcctgaagttccacctgg 60
||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||
Sbjct: 201 tcatctcaatgcagagcgtcctatgatggaccaagccctctttcctgaagttgtagctgg 260
Query: 61 tatgatgttgggtatccagtagggaatcattaaatgaatggttgaatgaaatatcaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgatgttgggtatccagtagggaatcattaaatgaatggttgaatgaaatatcaaccc 320
Query: 121 agtgactctgtcttgcccttctgtgctgatctgtaaccatgaatggcaccactgtaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgactctgtcttgcccttctgtgctgatctgtaaccatgaatggcaccactgtaggga 380
Query: 181 gaacctgctacttgctgcttcccttgatgggactaaatttgctagggatgggtttgcaca 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 gaacctgctacttgctgcttcccttgatgggactgaatttgctagggatgggtttgcaca 440
Query: 241 cttgcctcctctatggggaaaggggtgtgcttctctcactagccctttcttctag 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgcctcctctatggggaaaggggtgtgcttctctcactagccctttcttctag 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
