Query= MSMg01no174_b10.b1 MSMg01no174_b10.b1 CHROMAT_FILE:
MSMg01no174_b10.b1 PHD_FILE: MSMg01no174_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:52 2005
(318 letters)
>mm_chr7_120160122_120160839
Length = 718
Score = 572 bits (296), Expect = e-168
Identities = 311/316 (98%), Gaps = 2/316 (0%)
Strand = Plus / Minus
Query: 4 ggaattccagcagggtacagatatgcatggcacctt-aacatcaagtttatccaaaaatc 62
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 518 ggaattccagcagggtacagatatgcatggcaccttaaacatcaagtttatcc-aaaatc 460
Query: 63 tatgcataaaacataatttagtctacattatgtaatatatgcatgtatacctatgagaac 122
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 459 gatgcataaaacataatttagtctatattatgtaatatatgcatgtatacctatgagaac 400
Query: 123 ttcggacacctgtggcttcaaccttaaggcttattggtcaaatgtttgggtcatttcata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttcggacacctgtggcttcaaccttaaggcttattggtcaaatgtttgggtcatttcata 340
Query: 183 ctgccagcttcgatgtcctggagccctcaaatggaaatctaagaggtgatcagtgttgac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctgccagcttcgatgtcctggagccctcaaatggaaatctaagaggtgatcagtgttgac 280
Query: 243 tctcccagactctcatgctaggttgtcatgttgcctgtgtattgaatggggatatctgtc 302
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 279 tctcccagactctcatgctaggttgtcatgttgcctgtgtattgaatgaggatatctgtc 220
Query: 303 actcaccacgaacaga 318
||||||||||||||||
Sbjct: 219 actcaccacgaacaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_b10.g1 MSMg01no174_b10.g1 CHROMAT_FILE:
MSMg01no174_b10.g1 PHD_FILE: MSMg01no174_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:52 2005
(588 letters)
>mm_chr7_120022957_120023944
Length = 988
Score = 1083 bits (560), Expect = 0.0
Identities = 581/588 (98%)
Strand = Plus / Plus
Query: 1 gcctgatctacagcatgaattccaggacagccagggttacacagaaaaagggggaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctgatctacagcatgaattccaggacagccagggttacacagaaaaagggggaaaaaa 260
Query: 61 aaacctgtttcgaaaaaaaaaacaaacaaaattggtatttatatctatcagtctgtctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacctgtttcgaaaaaaaaaacaaacaaaattggtatttatatctatcagtctgtctat 320
Query: 121 ctatatatgcatgcatgctcaaattttaaaaggtgtatattagtatatataatttggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctatatatgcatgcatgctcaaattttaaaaggtgtatattagtatatataatttggttt 380
Query: 181 ttgaggctactggaaggtaagtaaaaactgtctgtagtacagaaaacagacataaactat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaggctactggaaggtaagtaaaaactgtctgtagtacagaaaacagacataaactat 440
Query: 241 gaaaagcaaaagctgtgtcttaagcctcaatggtccttgaatcatgtatgacagcccttg 300
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||
Sbjct: 441 gaaaagcaaaagctgtgtcttaagcctcaatggtccttgaatcacgtatgacagtcattg 500
Query: 301 ttaaagataggaaatgggattgtttatccaagttaataagaaagcataagataattcgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaagataggaaatgggattgtttatccaagttaataagaaagcataagataattcgaa 560
Query: 361 gaaaccactttcactacttttaaattaaacagtagtgggttttaacgatgatgagatttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaccactttcactacttttaaattaaacagtagtgggttttaacgatgatgagatttc 620
Query: 421 ttataattagcgttttgtttgaatgtgaattggtgtagaaggtgcttagacagacatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttataattagcgttttgtttgaatgtgaattggtgtagaaggtgcttagacagacatttt 680
Query: 481 ttggttttgcttccaaaattgccccttttccccaggggattatctgcttcccccgaggga 540
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 681 ttggttttgcttccaaaattgccccttttccccagtggattatctgcttcccccaaggga 740
Query: 541 ccatttgggtcatgacttgcctgataatgtctccttataaggaggcct 588
||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 ccatttgggccatgacttgcctgataatgtctcctaataaggaggcct 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
