MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-178K15
Chromosome	7 (Build37)
Map Location	89,586,516 - 89,586,796
singlet/doublet	singlet
Overlap gene	Adamtsl3
Upstream gene	Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1, Sh3gl3
Downstream gene	1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik, EG666160
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cpeb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12877 MGI:108442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623355 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623355
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Ap3b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11775 MGI:1100869
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC048679 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210321 MGI:3510776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fsd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244091 MGI:2444310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Whdc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434204 MGI:2142282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Homer2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26557 MGI:1347354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610204K14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67148 MGI:1914398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110040N11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67290 MGI:1914540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btbd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83962 MGI:1933765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tm6sf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107769 MGI:1933209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043161 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043161
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Hdgfrp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29877 MGI:1352760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bnc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12173 MGI:1097164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3gl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20408 MGI:700011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adamtsl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269959 MGI:3028499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 6 Proteins

name	1700129I04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330577 MGI:1914618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eftud1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101592 MGI:2141969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038986 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC619808 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619808
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Rkhd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108797 MGI:1918252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 72 ESTs, 13 Proteins

name	LOC619909 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins pseudo : _no_value

name	A530021J07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330578 MGI:3687211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	EG666160 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666160 MGI:3643208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Cpeb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382425 GeneID:12877 MGI:108442
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoplasmic polyadenylation element binding protein 1 transcript_id : NM_007755.2

name	Ap3b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111038138 GeneID:11775 MGI:1100869
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor-related protein complex 3, beta 2 subunit transcript_id : NM_021492.3

name	BC048679 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381175 GeneID:210321 MGI:3510776
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC048679 transcript_id : NM_183143.2

name	Fsd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116063549 GeneID:244091 MGI:2444310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type III and SPRY domain containing 2 transcript_id : NM_172904.2

name	Whdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138589 GeneID:434204 MGI:2142282
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WAS protein homology region 2 domain containing 1 transcript_id : NM_001004185.2

name	Homer2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58372171 GeneID:26557 MGI:1347354
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homer homolog 2 (Drosophila) transcript_id : NM_011983.1

name	2610204K14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892326 GeneID:67148 MGI:1914398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610204K14 gene transcript_id : NM_025997.2

name	3110040N11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375372 GeneID:67290 MGI:1914540
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110040N11 gene transcript_id : NM_026077.2

name	Btbd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83649718 GeneID:83962 MGI:1933765
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BTB (POZ) domain containing 1 transcript_id : NM_146193.2

name	Tm6sf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802247 GeneID:107769 MGI:1933209
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane 6 superfamily member 1 transcript_id : NM_145375.2

name	LOC100043161 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257528 GeneID:100043161
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043161 transcript_id : XM_001479653.1

name	Hdgfrp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84794635 GeneID:29877 MGI:1352760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hepatoma-derived growth factor, related protein 3 transcript_id : NM_013886.4

name	Bnc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34916061 GeneID:12173 MGI:1097164
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basonuclin 1 transcript_id : NM_007562.1

name	Sh3gl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226238 GeneID:20408 MGI:700011
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-domain GRB2-like 3 transcript_id : NM_017400.2

name	Adamtsl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380776 GeneID:269959 MGI:3028499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 6 Proteins product : ADAMTS-like 3 transcript_id : XM_194370.6

name	1700129I04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288849 GeneID:330577 MGI:1914618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700129I04 gene transcript_id : NM_177894.4

name	Eftud1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341587 GeneID:101592 MGI:2141969
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elongation factor Tu GTP binding domain containing 1 transcript_id : NM_175317.2

name	LOC100038986 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257534 GeneID:100038986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100038986 transcript_id : XM_001472043.1

name	LOC619808 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94380778 GeneID:619808
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC619808 transcript_id : XM_884181.2

name	Rkhd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257536 GeneID:108797 MGI:1918252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 72 ESTs, 13 Proteins product : ring finger and KH domain containing 3 transcript_id : XM_620516.4

name	Cpeb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681003 GeneID:12877 MGI:108442
definition	GO_component : GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0003729 - mRNA binding [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0048168 - regulation of neuronal synaptic plasticity [Evidence IMP]; GO:0006445 - regulation of translation [Evidence IDA]; GO:0007130 - synaptonemal complex formation [Evidence IMP] codon_start : 1 product : cytoplasmic polyadenylation element binding protein 1 protein_id : NP_031781.1

name	Ap3b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52317148 CCDS:CCDS21403.1 GeneID:11775 MGI:1100869
definition	GO_component : GO:0005905 - coated pit [Evidence IEA]; GO:0005802 - Golgi trans face [Evidence TAS] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence TAS] codon_start : 1 note : adaptor-related protein complex AP-3, beta 2 subunit product : adaptor-related protein complex 3, beta 2 subunit protein_id : NP_067467.2

name	BC048679 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147159 GeneID:210321 MGI:3510776
definition	codon_start : 1 note : epididymal protein Av381126 product : hypothetical protein LOC210321 protein_id : NP_898966.1

name	Fsd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116063550 GeneID:244091 MGI:2444310
definition	GO_component : GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : SPRY domain containing 1 product : fibronectin type III and SPRY domain containing 2 protein_id : NP_766492.2

name	Whdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138590 GeneID:434204 MGI:2142282
definition	codon_start : 1 exception : mismatches in translation product : WAS protein homology region 2 domain containing 1 protein_id : NP_001004185.2

name	Homer2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58372172 GeneID:26557 MGI:1347354
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0030160 - GKAP/Homer scaffold activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence TAS] codon_start : 1 note : homer, neuronal immediate early gene, 2 product : homer homolog 2 protein_id : NP_036113.1

name	2610204K14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313122 CCDS:CCDS21406.1 GeneID:67148 MGI:1914398
definition	codon_start : 1 product : hypothetical protein LOC67148 protein_id : NP_080273.1

name	3110040N11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385576 GeneID:67290 MGI:1914540
definition	codon_start : 1 product : hypothetical protein LOC67290 protein_id : NP_080353.1

name	Btbd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83649719 CCDS:CCDS21407.1 GeneID:83962 MGI:1933765
definition	codon_start : 1 product : BTB (POZ) domain containing 1 protein_id : NP_666305.2

name	Tm6sf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703752 CCDS:CCDS21408.1 GeneID:107769 MGI:1933209
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transmembrane 6 superfamily member 1 protein_id : NP_663350.1

name	LOC100043161 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257529 GeneID:100043161
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479703.1

name	Hdgfrp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34787412 GeneID:29877 MGI:1352760
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence NAS]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008283 - cell proliferation [Evidence ISS] codon_start : 1 product : hepatoma-derived growth factor, related protein 3 protein_id : NP_038914.2

name	Bnc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34916062 GeneID:12173 MGI:1097164
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : putative transcription factor product : basonuclin 1 protein_id : NP_031588.1

name	Sh3gl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226239 GeneID:20408 MGI:700011
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence IDA] codon_start : 1 note : SH3 domain protein 2 C2; endophilin III product : SH3-domain GRB2-like 3 protein_id : NP_059096.2

name	Adamtsl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380777 GeneID:269959 MGI:3028499
definition	codon_start : 1 product : ADAMTS-like 3 protein_id : XP_194370.6

name	1700129I04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288850 CCDS:CCDS21409.1 GeneID:330577 MGI:1914618
definition	codon_start : 1 product : hypothetical protein LOC330577 protein_id : NP_808562.3

name	Eftud1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424996 CCDS:CCDS21410.1 GeneID:101592 MGI:2141969
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003746 - translation elongation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : elongation factor Tu GTP binding domain containing 1 protein_id : NP_780526.1

name	LOC100038986 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257535 GeneID:100038986
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472093.1

name	LOC619808 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82906977 GeneID:619808
definition	codon_start : 1 product : hypothetical protein protein_id : XP_889274.1

name	Rkhd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257537 GeneID:108797 MGI:1918252
definition	codon_start : 1 product : ring finger and KH domain containing 3 protein_id : XP_620516.3

name	LOC623355 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623355
definition	number : 1 pseudo : _no_value

name	LOC619909 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257538 GeneID:619909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins product : similar to Hmgb1 protein pseudo : _no_value transcript_id : XR_030581.1

name	A530021J07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149257539 GeneID:330578 MGI:3687211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : Riken cDNA A530021J07 gene transcript_id : XR_035179.1

name	EG666160 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94380781 GeneID:666160 MGI:3643208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : predicted gene, EG666160 pseudo : _no_value transcript_id : XR_001840.1

clone name	MSMg01-484J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331J02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-433E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253H03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-178K15.T7 (MSMg01no178_k15.b1)	MSMg01-178K15.TJ (MSMg01no178_k15.g1)
ACC	AG372680	AG372681
length	803	722
length of high quality (start - end)	202 (72 - 273)	282 (75 - 356)
definition	CHROMAT_FILE: MSMg01no178_k15.b1 PHD_FILE: MSMg01no178_k15.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:51:31 2005	CHROMAT_FILE: MSMg01no178_k15.g1 PHD_FILE: MSMg01no178_k15.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:51:31 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CATATXXXXXXXXXXXXXXXXXXXXXXXXXNANATTCGAGAGGATCCGCG GAATTCCTAACATTGACAGAATGTGTGTCTGTTTCTTTTTGCCAGCATTT GAGACTCTTTCCTCCCGTTGAGCTGCTTTGTCTAGGTTCAAAGTGAGGGC TGTCACCTCATCTGACTATATCGTGATTTGTCATGTTTGGTGTTGTCTCC TGGAGGCCTGATCCTTTCTATAGGGAAACTGAGGGAGAGTGCATCTGGGG GGAGGGAGAGGCCTGTGTGGGGTGCCGTCCCCCGTTTTTTTCCGGTCGGC TTGACTGTCGCGAGCTTTTTTTTTTTACCTTCTGTTTTCAATCCAACGAT ATACTGTTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCTCGTTTTTTTTT TTTTTTACTTTTTCTTTTTTTTCCCCCCCCTTTTAAAAAAAAAAAAATTC TTTTATTCTATTTCTTCCGTCCATATTCAACACCTTTTCCCTATTAATCC TACTCCTATATTCCCCCCAATTTACACTATTCCCACTCTCCTTCCTCCCT TATCTCCCTCCTTATTTTCCCTCCTCCTTCCGTGCCCCTTTTTCTCCAAT TTTGACCACCATTTTCTTATTCCCTTTTTTGATGATATATCAATAAAACT ACCCCTTTTTATCCCCCCTTTCCTTCCTCTTCTATTTTTTTCCTATCACT ACTCCCGTATTTTCCACCCCTGTTTTTGAATTTATCTTTCTATCCCTACA ATTATATCCTAAACCTTTCTGTGTTTCTCACCCCCACTTTTCCCCCCCCC CCC	CGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXCATTGTGTTCTTCTGAAATGTTCTGT GAAACTTATAAACCTCCAGATCCCGTGGTCTCCCTGAATTCATCTGACTT AAACAGGTATATGAGCTTACAAAATATCCTAAACTTTGCATACATATGTG TGTATATGATATGTGCATACATACATCTACACAGGATTGTGTATTACATA TGTGTATTGAATGTAAGGTCAGCTGAGATAACAATTTGCTGTCTGGTGTC GACAATAGATAAATGGATGATTTTATATTTTTGTCCCTCCATCTTGGCTC TAGGCCTTTGAATANCTGCCTAACCATCCCCAAACAAGGGACAGTAATGA CATTCTCTTCCTGACCCACCAAAAAGAAAAATGAGAGAAGGGTAGGCGGC TTTTATTTATTTACTTATTTTTATCTATTTTTTACCCTTTCCATAAATCC CACTGGATTCATGCTCCATTTCCCTCCCTTTCCTCTTATTCCCCCTCATC ACTTTTCCCCCCTCTTTATACCCCCTTCCCTTAACACTTTTACTTCACCC TCGCCATCCCCTTTAAACACCTACTATCTAACATTTTCTACCTTTCTTTT TACTCCTCCTTTCACATATCACCACCATTAACTCCTTTCTCCCCCCTTTT GTTTTGCCCTCCCCTCTCCCCC
quality values	Open. Hide. 8 8 8 8 12 12 11 16 30 40 37 29 28 28 22 22 30 30 28 24 23 32 37 37 47 59 21 19 8 3 0 3 0 3 6 6 6 8 10 13 16 15 15 18 24 28 31 59 48 53 36 35 35 31 31 31 59 59 41 28 22 12 12 12 12 12 6 6 6 6 8 8 17 26 39 43 47 50 50 53 53 57 57 59 59 59 59 59 50 50 47 53 50 50 50 53 57 57 68 68 68 68 57 54 54 54 54 54 68 68 68 68 59 59 48 48 48 48 40 26 12 9 9 9 9 12 34 41 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 51 50 50 50 50 57 68 68 68 68 68 68 68 68 68 68 59 57 57 57 54 54 54 59 59 57 57 57 54 68 68 68 68 68 68 68 68 54 57 40 40 30 28 28 22 26 17 25 24 37 37 39 39 43 43 37 37 30 21 21 24 22 17 12 19 10 10 8 8 11 8 10 12 8 6 6 8 8 14 14 18 19 18 14 9 9 9 9 11 12 12 10 8 6 6 8 10 14 13 12 10 10 13 13 6 6 6 6 8 10 14 17 12 12 14 12 13 9 9 9 10 10 10 10 10 10 11 12 11 10 10 9 8 8 8 8 8 8 8 8 8 8 8 7 7 8 8 8 8 11 11 17 20 17 17 19 39 34 15 8 8 8 10 10 15 17 19 30 28 27 27 27 22 13 10 9 8 10 10 10 8 8 8 8 10 10 12 15 12 13 15 15 16 13 18 20 12 11 8 7 8 8 11 11 17 22 28 20 23 11 10 8 8 8 8 8 11 14 16 16 12 10 10 10 10 11 11 12 12 14 18 18 20 23 18 12 11 11 11 8 12 10 10 8 15 8 8 8 8 8 8 10 10 13 10 12 10 10 8 8 8 8 7 7 6 7 8 8 13 15 10 10 10 10 8 8 8 8 8 9 9 9 13 12 11 11 11 11 11 11 11 9 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 13 15 16 11 18 18 13 12 12 11 8 8 8 8 9 10 10 9 10 8 8 6 7 8 8 10 8 8 8 10 8 8 8 8 8 8 10 8 8 8 8 8 12 10 8 8 8 8 8 8 8 8 6 8 6 6 10 8 8 8 8 8 8 10 8 8 8 8 8 8 9 11 12 12 17 14 14 10 11 8 9 9 11 14 11 10 10 10 16 8 8 6 6 8 10 10 8 8 11 10 8 8 8 8 6 9 11 10 8 8 8 8 8 8 8 7 9 9 9 10 10 8 7 7 8 12 12 12 9 8 8 6 6 8 8 10 13 15 16 10 10 12 10 9 9 8 8 13 9 9 10 10 10 17 9 9 9 9 9 9 9 8 11 13 8 8 8 8 8 12 10 24 12 11 12 12 12 8 8 8 8 8 8 8 8 8 10 13 12 8 8 8 8 8 14 13 17 9 9 9 10 15 9 8 7 7 7 10 13 10 8 8 8 8 9 10 8 8 8 8 8 10 10 10 10 9 9 9 8 8 8 10 8 8 8 6 6 8 8 8 8 8 8 8 12 12 18 19 23 28 34 18 16 8 8 8 8 6 10 8 8 8 8 8 8 10 8 8 8 8 8 8 15 15 14 14 14 12 18 16 17 18 16 16 16 16 16	Open. Hide. 9 9 6 8 8 8 8 8 17 16 18 10 10 10 21 30 50 50 50 50 53 53 50 50 50 50 47 37 23 19 8 8 8 8 8 8 17 10 16 16 28 23 48 48 53 57 53 53 50 50 50 53 53 53 53 53 48 27 23 10 10 12 19 26 22 24 24 28 24 41 42 42 50 51 51 51 50 50 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 53 53 47 47 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 37 37 37 30 30 16 18 11 11 11 11 15 17 34 43 50 50 50 50 53 53 38 38 42 42 53 53 50 50 53 57 57 57 57 57 59 59 57 68 68 68 68 68 68 68 51 51 51 51 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 57 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 57 57 57 57 57 43 43 48 48 57 54 48 42 37 21 20 11 10 8 8 8 10 19 32 41 47 43 59 59 59 57 48 57 57 57 57 57 57 57 57 57 57 59 59 59 59 48 48 59 59 47 34 32 15 16 11 12 9 6 6 6 6 3 0 3 9 12 12 9 6 6 6 6 6 6 6 9 13 19 12 12 11 21 25 34 37 37 30 30 30 37 37 37 39 39 23 17 8 8 8 17 22 59 59 59 59 46 30 21 11 9 9 9 13 11 9 6 6 6 6 7 7 7 6 6 6 7 7 7 15 12 12 9 12 16 28 19 22 15 19 19 22 22 14 14 8 13 7 6 8 8 16 21 24 19 19 23 28 25 16 12 11 16 16 24 31 28 28 23 23 15 10 8 8 8 8 10 12 12 10 12 9 9 9 9 9 9 12 10 8 6 6 8 8 8 8 11 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 10 11 12 13 10 8 8 9 8 12 15 20 20 19 17 10 10 10 13 9 8 10 10 12 15 14 14 14 10 9 9 9 9 9 9 9 12 17 15 12 11 16 10 9 12 18 22 19 15 7 6 6 6 11 8 8 8 8 10 8 8 8 8 10 8 8 8 8 8 11 12 10 22 22 19 12 11 8 8 6 6 8 8 10 10 8 8 10 8 8 8 15 15 21 12 12 8 8 8 10 8 8 8 16 16 16 8 8 8 8 8 8 6 6 8 8 8 10 9 6 8 6 6 6 6 8 8 8 11 9 10 9 13 9 8 8 8 8 9 9 12 17 21 14 12 8 8 10 10 8 8 8 8 10 14 19 13 12 8 8 8 8 8 12 12 13 8 8 8 8 17 25 30 30 23 23 19 18 23 16 12 9 9 9 9 10 11 11 9 9 11 12 12 13 9 10 8 8 8 8 8 8 7 7 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no178_k15.g1 MSMg01no178_k15.g1 CHROMAT_FILE:
MSMg01no178_k15.g1 PHD_FILE: MSMg01no178_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:31 2005
         (282 letters)



>mm_chr7_89586316_89586996
          Length = 681

 Score =  453 bits (234), Expect = e-132
 Identities = 270/288 (93%), Gaps = 13/288 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattgtgttcttctgaaatgttctgtgaaacttataaacctccagatccc--gtggtctc 58
           ||||||||| |||||||||||||||||||||||||||||||||||||     ||||||||
Sbjct: 201 cattgtgtttttctgaaatgttctgtgaaacttataaacctccagat---ttgtggtctc 257

                                                                       
Query: 59  cctgaattcatctgacttaaacaggtatatgagcttacaaaatatcctaaactttgcata 118
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 258 cctgaattcatctgacttaaacaggtatatgagcttacaaaatatcctaaactttgtata 317

                                                                       
Query: 119 catatgtgtgtatatgatatgtgcatacatacatctacacaggattgtgtattacatatg 178
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 catatgtgtatatatgatatgtgcatacatacatctacacaggattgtgtattacatatg 377

                                                                       
Query: 179 tgtattgaatgtaaggtcagctgagataacaatttgctgtctggtgtcgacaatagataa 238
           ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 378 tgtattgtatgtaaggtcagctgagataacaacttgctgtctggtgtcgacaatagataa 437

                                                           
Query: 239 atggatgatttt----atatttttgtccctccatcttggctctaggcc 282
           ||||||||        ||||||||||||||||||||||||||||||||
Sbjct: 438 atggatga----cggaatatttttgtccctccatcttggctctaggcc 481


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space:   183456
Effective search space used:   183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information