Query= MSMg01no179_c02.b1 MSMg01no179_c02.b1 CHROMAT_FILE:
MSMg01no179_c02.b1 PHD_FILE: MSMg01no179_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:04 2005
(423 letters)
>mm_chr7_121966388_121967209
Length = 822
Score = 770 bits (398), Expect = 0.0
Identities = 413/418 (98%), Gaps = 1/418 (0%)
Strand = Plus / Minus
Query: 6 gaattcaacagacagaccccagtgtaggaggaacgatgaggaaacagagaatcaaggtga 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaattcaacagacagactccagtgtaggaggaacgatgaggaaacagagaatcaaggtga 563
Query: 66 ttagtccgcccacacaggacagcaggctaactctggtccttgtttctgatctccaggcct 125
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttggtccgcccacacaggacagcaggctaactctggtccttgtttctgatctccaggcct 503
Query: 126 atgcctccctctatggagcctttgagaaaaaaatgggaggagctggaataaatggccagg 185
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 502 atgcctccctctatggagcctttgag-aaaaaatgggaggagctggaataaatggccagg 444
Query: 186 tcaaaggaggtcactcagctcagctcctatgaaaggccgaggagcagtcctgcctgaggc 245
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 443 tcaaaggaggtcactcagctcagctcctatgaaaggctgaggagcagtcctgcctgaggc 384
Query: 246 cagctccttcaaacactagtccaatttcaggactgtctccagcccctaattgcctgcttc 305
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 383 cagctccttcaaacactagtccaatttcaggactgtctccagcccctaattgcccgcttc 324
Query: 306 ccattgctagccataaagttggtgccaagagagtactctaatcaaagcacttacacattc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccattgctagccataaagttggtgccaagagagtactctaatcaaagcacttacacattc 264
Query: 366 ctaaggaaatggctgctgaaagcacttacagataattagctcttacatggagtggggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctaaggaaatggctgctgaaagcacttacagataattagctcttacatggagtggggt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 822
Length adjustment: 9
Effective length of query: 414
Effective length of database: 813
Effective search space: 336582
Effective search space used: 336582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_c02.g1 MSMg01no179_c02.g1 CHROMAT_FILE:
MSMg01no179_c02.g1 PHD_FILE: MSMg01no179_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:04 2005
(562 letters)
>mm_chr7_121849430_121850391
Length = 962
Score = 820 bits (424), Expect = 0.0
Identities = 433/436 (99%), Gaps = 2/436 (0%)
Strand = Plus / Plus
Query: 128 gagaacttcttgcttatgtcattggtctgcagagttggccctggccaactgttcagaaca 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gagaacttcttgcttatgtcattggtctgcagagttggccctggccaactgttcagaaca 387
Query: 188 gggcaatttgtatatacagcaactctccaactttcattttcaaaaaggatttatttttat 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gggcaatttgtatatacagcaactctccaactttcattttcaaaaaggatttatttttat 447
Query: 248 ccccaaaatatccttcaatttacttatctaaggagccctgcttctctggcaactctcctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ccccaaaatatccttcaatttacttatctaaggagccctgcttctctggcaactctcctc 507
Query: 308 tgactacattagttggaaacctctctgaacacctctgcttggctgccaatctgctcaact 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgactacattagttggaaacctctctgaacacctctgcttggctgccaatctgctcaact 567
Query: 368 gacagcatctaagagaagacctctctggaaataaggggaagaatctctcaggaata-acc 426
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 568 gacagcatctaagagaagacctctctggaaataaggggaagaatctctcaggaatacac- 626
Query: 427 aaaacacagcctttcccaaccacaccattttccctcaaaatgttcaccaaagagaaacag 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aaaacacagcctttcccaaccacaccattttccctcaaaatgttcaccaaagagaaacag 686
Query: 487 ctttatggaaatctctcctagggctttcctttccagagcctggaaaccacttctatttga 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctttatggaaatctctcctagggctttcctttccagagcctggaaaccacttctatttga 746
Query: 547 gatatataaactgtct 562
|||||| |||||||||
Sbjct: 747 gatatagaaactgtct 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
