Query= MSMg01no180_d14.b1 MSMg01no180_d14.b1 CHROMAT_FILE:
MSMg01no180_d14.b1 PHD_FILE: MSMg01no180_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:25 2005
(224 letters)
>mm_chr1_70097055_70097678
Length = 624
Score = 410 bits (212), Expect = e-119
Identities = 221/224 (98%)
Strand = Plus / Minus
Query: 1 ataaacatattagcataatactgtggttaaaatactaattttcactcacaaaactaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ataaacatattagcataatactgtggttaaaatactaattttcactcacaaaactaatgt 365
Query: 61 aagactaattatcttaagtgctcccatgttgaaaatgagcaaatttttggtcttgaagta 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagactaattatgttaagtgctcccatgttgaaaatgagcaaatttttggtcttgaagta 305
Query: 121 acagcagtatatatttatgtatttgtaattagaaaaacattgtctctctgaatccttaat 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 304 acagcagtatatatttatgtatttgtaattagaaaaacatcgtctctctgaatccttaat 245
Query: 181 ctaatgccctactgggaaattacatctttatacttaaaaagcca 224
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 244 ctaatgccctactgggaaattacatctttacacttaaaaagcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no180_d14.g1 MSMg01no180_d14.g1 CHROMAT_FILE:
MSMg01no180_d14.g1 PHD_FILE: MSMg01no180_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:25 2005
(336 letters)
>mm_chr7_124245638_124246373
Length = 736
Score = 607 bits (314), Expect = e-178
Identities = 335/352 (95%), Gaps = 16/352 (4%)
Strand = Plus / Minus
Query: 1 ttaatatcctcagagttccacaatcatgtacacatttgtgcaccctcactatacagaaca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 664 ttaatatcctcagagttccacaatcatgtacacatttgtgcaccctgactatacagaaca 605
Query: 61 cacacacacacacacacacacacacac----------------gcatgcacgaacacaca 104
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 604 cacacacacacacacacacacacacacacacacacacacacgtgcatgcacgaacacaca 545
Query: 105 tgcacacagttgtgtgcaagtcgcatacacatgaaaagaagaaagaggaaaaatggccag 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgcacacagttgtgtgcaagtcgcatacacatgaaaagaagaaagaggaaaaatggccag 485
Query: 165 aatttaacaatttgtactctgcaaagtcacctatcactggtttctttcctccttcccttc 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aatttaacaatttgtactctgcaaagtcacctatcactggtttctttcctccttcccttc 425
Query: 225 cttcctccaaacttccttgtcattccagtggggcttaagtagttacattaggcagggttc 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cttcctccaaacttccttgtcattccagtggggcttaagtagttacattaggcagggttc 365
Query: 285 tctagaaatgcagcatcagcaatatatgcaggctggtggagttattggatgg 336
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctagaaatgcagcatcagcaatatatgcaggctggtggagttattggatgg 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
