Query= MSMg01no185_j13.b1 MSMg01no185_j13.b1 CHROMAT_FILE:
MSMg01no185_j13.b1 PHD_FILE: MSMg01no185_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:20 2005
(313 letters)
>mm_chr7_148157628_148158340
Length = 713
Score = 551 bits (285), Expect = e-161
Identities = 303/309 (98%)
Strand = Plus / Plus
Query: 5 gaattcctagaaggcagatgttttccttccagttatgaaacaaccatcattaaagagaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctagaaggcagatgttttccttccagttatgaaacaaccatcattaaagagaag 264
Query: 65 cctgcacttgatcccaatgtgggaaactccgagtttaccccacggaaccaatcagagagc 124
||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 cctgcacaagatcgcaatgtgggaaactccgagtttatcccacggaaccaatcagagagc 324
Query: 125 tgacctcagaactgagctaaggggctggagagatgactcgggggttaagagcacttgttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgacctcagaactgagctaaggggctggagagatgactcgggggttaagagcacttgttg 384
Query: 185 cttttccaaacaaccctggttcaattcccagccctacacggcagctcacagccttctgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttttccaaacaaccctggttcaattcccagccctacacggcagctcacagccttctgta 444
Query: 245 acactcgatgtgtaggggatccagcgtcctcttccgggcaccaggcaggcacacgggcta 304
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 445 acactcgatgtgtaggggatccagcatcctcttccaggcaccaggcaggcacacgggcta 504
Query: 305 agacacgca 313
|||||||||
Sbjct: 505 agacacgca 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_j13.g1 MSMg01no185_j13.g1 CHROMAT_FILE:
MSMg01no185_j13.g1 PHD_FILE: MSMg01no185_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:20 2005
(288 letters)
>mm_chr7_148307062_148307751
Length = 690
Score = 520 bits (269), Expect = e-152
Identities = 282/287 (98%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 tgtagggcagccccacccatgtgtgaaaaacacaaggccagcttcagaaagagagacgtg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 487 tgtagggcagccccacccatgtgtgaaaaacacaaggccagcttcagaaagagagatgtg 428
Query: 61 ataggctggcaacctgagagacgattgagtctccccttgcatggaacaaggttggaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ataggctggcaacctgagagacgattgagtctccccttgcatggaacaaggttggaaacc 368
Query: 121 agcccagagag--gataggaagcggattcttggaggcagccacttccactcagaggcatc 178
||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 367 agcccagagagaagataggaagtgggttcttggaggcagccacttccactcagaggcatc 308
Query: 179 ttggtcaaagggatggagtattatctagtcacatgattgacacattcctgaagggctgga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttggtcaaagggatggagtattatctagtcacatgattgacacattcctgaagggctgga 248
Query: 239 ggtcctagggcaagggcacctagcctttggagtttcactgcccccta 285
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggtcctagggcaagggcacctagcctttggagtttcactgcccccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 690
Length adjustment: 9
Effective length of query: 279
Effective length of database: 681
Effective search space: 189999
Effective search space used: 189999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
