TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTTAGCTCTGAGACCCATTTTTAAATGGGGTTATTTGATTT
TCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCATTCTGTTGTTGGCCTT
TTTGTCTTATTGATGGTGTCTTTTGCCTTACAGAAGCTATGCAATTTTAT
GAGGTCCCACTTGTCGATTCTTGATCTTACAGCACAAGCCATTGCTGTTC
TACTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGATTTCCCCCACT
TTTTCCTCTATAATTTTTTTTGTTCCCCCCCCCCCCCTTGTTAGAATTGG
AAACAAAACACCCTTGCACCCCCTTACAGAGACAAAGATAATTAGTTGAT
ATGATTGCATGTACCATCCTTTTGACCTGCCATATTCGTGTTACACTTTC
TATATCCGTTCTCTATACGTTGACATCTTTGTCTACTTTTTCATTATTTT
TGCTTTCTACACTCTTTTCTAGCTCTCTTTTTTTTGTCCTTTTTTCCTTT
TTATCTTTTTCATTAATTATTTTTTATGCCATTTTTTTCCCTCGTTTTTT
TATTTTTTCTTCTTCTTTTTACACATCTTTTTTATTCATACGATTGTCGT
ACCATTTAATTGCGATTTTGAATCCTTTACAGTGGCTTTCTTTACTTTTT
ATTTATTTACTTTCTCTCTTTTAATACTACTTTCTTTCCTTTACN

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACCCAGAAGCTGTTGAGCTCATGG
ATTTGGCTAAACAGGAGTCAGGCCCAGAATTACCTGGCCTTGAAATTAGA
AACTAGGTTATACGCAATACCCACTAAATGTTTCATATTCTCACTTCATT
CCTCCTACTCTTTATTTGCCTCCCCCTTTCTTCTTCCTCCTTCTCTTATT
CTGCCTTCCTCATCTTCCTCCTTTTCTTCTTCTTGATAGGACCTACTTCA
AAGACTCATGCTTGTTTAGAAAGCACAGATCTGGAAACTCATTCTGCTGA
GTGCTTGGCTCACAGGTATGGGCAAACCATGACCTACTATCATTTTTCTT
CATCAATATTTTCAAAATAGGAACAGGGATGTGCTTCTACATCTGAGCAA
AGACTATGCTGTGTAGCAGAACACTGTGGGTAACTAGAGAGTGTCTACAA
TCATAAGATTTACAGACAAAACATTCATCATAAGGGTTTAGCCATTAAGC
ATAAATATGCCAGAAATTACTAACAGGTATTTCTATAAGAAAAGTACTTG
GCAATTGTGTAAGCTATAGAATGTGGGTAGCAATAATCAACTTAAAATAA
GGAAAGAAAAAATTAAGTATTTTATATTGATGGGAAACATATAGCATAGT
ACTATTACTAGATTATATGAGTGTAATTTTGAAACTC

Query= MSMg01no188_l06.g1 MSMg01no188_l06.g1 CHROMAT_FILE:
MSMg01no188_l06.g1 PHD_FILE: MSMg01no188_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:26 2005
         (555 letters)



>mm_chr7_65208774_65209728
          Length = 955

 Score =  957 bits (495), Expect = 0.0
 Identities = 533/547 (97%), Gaps = 3/547 (0%)
 Strand = Plus / Minus

                                                                       
Query: 12  gttgagctcatggatttggctaaacaggagtcaggcccagaattacctggccttgaaatt 71
           ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 955 gttgagctcatggatttggctaaacaggaatcaggcccagaattacatggccttgaaatt 896

                                                                       
Query: 72  agaaactaggttatacgcaatacccactaaatgtttcatattctcacttcattcctccta 131
           |||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 895 agaagctaggttatacgtaatacccactaaatgtttcatattctcacttgattcctccta 836

                                                                       
Query: 132 ctctttatttgcctccccctttcttcttcctccttctcttattctgccttcctca---tc 188
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||
Sbjct: 835 ctctttatttgcctccccctttcttcttcctccttctcttattctgccttcctcatcttc 776

                                                                       
Query: 189 ttcctccttttcttcttcttgataggacctacttcaaagactcatgcttgtttagaaagc 248
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 775 ttcctccttttcttcttcttgataggacctccttcaaagactcatgcttgtttagaaagc 716

                                                                       
Query: 249 acagatctggaaactcattctgctgagtgcttggctcacaggtatgggcaaaccatgacc 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 acagatctggaaactcattctgctgagtgcttggctcacaggtatgggcaaaccatgacc 656

                                                                       
Query: 309 tactatcatttttcttcatcaatattttcaaaataggaacagggatgtgcttctacatct 368
           |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 655 tactatcatttttcttcatcgatattttcaaaataggaatagggatgtgcttctacatct 596

                                                                       
Query: 369 gagcaaagactatgctgtgtagcagaacactgtgggtaactagagagtgtctacaatcat 428
           | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 595 gggcaaagactatgctgtgtagcagaacactgtgggtaattagagagtgtctacaatcgt 536

                                                                       
Query: 429 aagatttacagacaaaacattcatcataagggtttagccattaagcataaatatgccaga 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aagatttacagacaaaacattcatcataagggtttagccattaagcataaatatgccaga 476

                                                                       
Query: 489 aattactaacaggtatttctataagaaaagtacttggcaattgtgtaagctatagaatgt 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aattactaacaggtatttctataagaaaagtacttggcaattgtgtaagctatagaatgt 416

                  
Query: 549 gggtagc 555
           |||||||
Sbjct: 415 gggtagc 409


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)