Query= MSMg01no188_m15.b1 MSMg01no188_m15.b1 CHROMAT_FILE:
MSMg01no188_m15.b1 PHD_FILE: MSMg01no188_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:33 2005
(315 letters)
>mm_chr7_64716896_64717610
Length = 715
Score = 563 bits (291), Expect = e-165
Identities = 306/311 (98%), Gaps = 3/311 (0%)
Strand = Plus / Plus
Query: 5 gaattccatcctttaaaattactatacccagtacaagtctgtaatctcaacactccagca 64
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccaccctttaaaattactatacccagtacaagtctgtaatctcaacactccagca 263
Query: 65 gttgaggcaggaagat-ggaaggtcagtgctacattggactaaatagcaagatcctgtct 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 264 gttgaggcaggaagattggaaggtcagtgctacattggactaaatagcaagatcctg-ct 322
Query: 124 -caaaatctctcctttcctctcaaacatttactattgatatagcatagctcacatttgtt 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcaaaatctctcctttcctctcaaacatttactattgatatagcatagctcacatttgtt 382
Query: 183 tcagaaatgaacacacacaaatcttacaacttacttcaagcttcagttgcagagttcatg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcagaaatgaacacacacaaatcttacaacttacttcaagcttcagttgcagagttcatg 442
Query: 243 ggttgttctaaggataactgattcatttcatatgcttgggtataactggaatgtacatga 302
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 443 ggttgttctaaggataactgattcatttcatatgcttgggtataactagaatgtacatga 502
Query: 303 gtccaaccacc 313
|||||||||||
Sbjct: 503 gtccaaccacc 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_m15.g1 MSMg01no188_m15.g1 CHROMAT_FILE:
MSMg01no188_m15.g1 PHD_FILE: MSMg01no188_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:33 2005
(177 letters)
>mm_chr7_64757749_64758323
Length = 575
Score = 286 bits (148), Expect = 4e-82
Identities = 169/177 (95%), Gaps = 2/177 (1%)
Strand = Plus / Minus
Query: 1 accaacaggcatatatgggngcattgcatgcattttcagaatgatgttgttaaaacatgc 60
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 accaacaggc--atatgggtgcattgcatgcattttcagaatgatgttgttaaaacatgc 318
Query: 61 tgtttacttttcaccaagtcctcacttggtgcataagaagagctcccaccttattttact 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 317 tgtttacttttcaccaagtcctcacttggtgcataagaagagctcccactttatagaact 258
Query: 121 tatggaatcgtgttcagttttttctgatgaaagtggtagaatcactccttgcctcct 177
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatggaattgtgttcagttttttctgatgaaagtggtagaatcactccttgcctcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 575
Length adjustment: 8
Effective length of query: 169
Effective length of database: 567
Effective search space: 95823
Effective search space used: 95823
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
