Query= MSMg01no189_e14.b1 MSMg01no189_e14.b1 CHROMAT_FILE:
MSMg01no189_e14.b1 PHD_FILE: MSMg01no189_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:14 2005
(319 letters)
>mm_chr7_89755959_89756678
Length = 720
Score = 549 bits (284), Expect = e-161
Identities = 305/312 (97%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 5 gaattcactttgatttctaaatgtctaccccataacaatgtaactctctgagcataaaga 64
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 516 gaattcactttgatttctaaatgtctactacataacaatgtaactctctgagcataaaga 457
Query: 65 catacattctaagaactttactgcaacatctgtttgtaaaagcaaaaaattgaagcaata 124
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 catacattctacgaagtttactgcaacatctgtttgtaaaagcaaaaaattgaagcaata 397
Query: 125 taccaccaaagaaacagcggaatattaaatatcatgcttaaatacaataaagtcaagatg 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 396 taccaccaaagaaacagcggaatattaaatatcatgcttaaatagaataaagtcaagatg 337
Query: 185 tgctaagatacaacatgtttataatctattcttaaatataaaatcaggtttcagaaaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgctaagatacaacatgtttataatctattcttaaatataaaatcaggtttcagaaaaat 277
Query: 245 atgtatattatgttcaattaaaaggctccatccatataagcatttgtgttgtaaagat-g 303
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 276 atgtatattatgttcaaataaaaggctccatccatataagcatttgtgttgtaaagatag 217
Query: 304 tctttatgactg 315
||||||||||||
Sbjct: 216 tctttatgactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_e14.g1 MSMg01no189_e14.g1 CHROMAT_FILE:
MSMg01no189_e14.g1 PHD_FILE: MSMg01no189_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:14 2005
(286 letters)
>mm_chr7_89695673_89696357
Length = 685
Score = 493 bits (255), Expect = e-144
Identities = 276/283 (97%), Gaps = 1/283 (0%)
Strand = Plus / Plus
Query: 1 cttattgctaaataaataaaacagaggtgtgggttgctgtagacttagatgaaggtgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 cttattgctaaataaataaaacagaggtgtgggttgctgtagacttagatgaaggcgcat 260
Query: 61 cacatacttgtgctatgggaggcacttctgctaataaaggaggcatctctaattgcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacatacttgtgctatgggaggcacttctgctaataaaggaggcatctctaattgcagaa 320
Query: 121 gcagtgcagaggagcttcagtcacagtgggacgattcagagcacaacagatttattgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagtgcagaggagcttcagtcacagtgggacgattcagagcacaacagatttattgatg 380
Query: 181 tgtggtgatctagaaacaaaatgatattctttagcagatgtagttttcccttaggaaacc 240
|||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtggtgatctaggaa-aaattggtattctttagcagatgtagttttcccttaggaaacc 439
Query: 241 ttaaagaaacacttcaactgcagggacaccccaagctatgaat 283
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 440 ttaaagaaacacttcaactgcagggacacccctagctatgaat 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
