Query= MSMg01no192_j23.b1 MSMg01no192_j23.b1 CHROMAT_FILE:
MSMg01no192_j23.b1 PHD_FILE: MSMg01no192_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:14 2005
(414 letters)
>mm_chr7_122211885_122212698
Length = 814
Score = 785 bits (406), Expect = 0.0
Identities = 406/406 (100%)
Strand = Plus / Minus
Query: 5 gaattcctaaggccctgaatttaattcctagcaccatataaagaagtgacatatatatgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gaattcctaaggccctgaatttaattcctagcaccatataaagaagtgacatatatatgc 551
Query: 65 actatggattaacttgggcaatcaatgaatagaaccacaactaagcatgtgacaagccac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 actatggattaacttgggcaatcaatgaatagaaccacaactaagcatgtgacaagccac 491
Query: 125 tcattttggagctaaacatttggaaaaggcagaaggcagaagaataggcataatttcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tcattttggagctaaacatttggaaaaggcagaaggcagaagaataggcataatttcttt 431
Query: 185 aatgccttcttcataggaactattttaaatgcagggaaacagctcttataaaatcatagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aatgccttcttcataggaactattttaaatgcagggaaacagctcttataaaatcatagc 371
Query: 245 aaaatatagcatcatgaaaaagattcaaggaacactactcatgtgctcccgtagtgtcac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaaatatagcatcatgaaaaagattcaaggaacactactcatgtgctcccgtagtgtcac 311
Query: 305 gagcaacatgggacagatggcacgtgatcaagcaaagggagctgctccttgaacccctgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gagcaacatgggacagatggcacgtgatcaagcaaagggagctgctccttgaacccctgc 251
Query: 365 atgttcgaaatacattatcttgctccaccttcaggaaactcttacg 410
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atgttcgaaatacattatcttgctccaccttcaggaaactcttacg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_j23.g1 MSMg01no192_j23.g1 CHROMAT_FILE:
MSMg01no192_j23.g1 PHD_FILE: MSMg01no192_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:14 2005
(327 letters)
>mm_chr7_122099138_122099868
Length = 731
Score = 578 bits (299), Expect = e-169
Identities = 320/329 (97%), Gaps = 4/329 (1%)
Strand = Plus / Plus
Query: 1 tattcattcaattcatctccaatcatctttcctttgcattagctttccctaaggtttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattcattcaattcatctccaatcatctttcctttgcattagctttccctaaggtttctc 260
Query: 61 agaaaatactggcagtaagtgacaaaggtacagcttaactgtcactatggtgagcccctt 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcaatactggcagtaagtgacaaaggtacagcttaactgtcactatggtgagcccctt 320
Query: 121 ggttcctcttgtataatcgccttatccatgcccccagcttctacacattttcctctgtcc 180
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 ggttcctcttatataatcgccttatccatgcccccaacttctacacattttcctctgtcc 380
Query: 181 acactttacttttcttcactaactgcttctgggatt----acagacccctatttcaaaga 236
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 acactttacttttcttcactaactgcttctgggattgattacagacccctatttcaaaga 440
Query: 237 aagagactaggattaactcctcgactttactggggtagcaaacgaactttctggattgta 296
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 aagagactaggattaactcctcgaccttactggggtagcaaacgaactttctggattgta 500
Query: 297 cattttaggaagcaggatgggagtggggc 325
|||||||||||||||||||||||||||||
Sbjct: 501 cattttaggaagcaggatgggagtggggc 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 731
Length adjustment: 9
Effective length of query: 318
Effective length of database: 722
Effective search space: 229596
Effective search space used: 229596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
