Query= MSMg01no194_b07.b1 MSMg01no194_b07.b1 CHROMAT_FILE:
MSMg01no194_b07.b1 PHD_FILE: MSMg01no194_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:52 2005
(681 letters)
>mm_chr7_74529409_74530490
Length = 1082
Score = 1201 bits (621), Expect = 0.0
Identities = 662/679 (97%), Gaps = 7/679 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagacgaaaga-ctacttctagcagatgcacaacagaaccttgcaagtgtcctg 62
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ggaattcagacgaaagatttacttctagcagatgcacaacagaaccttgcaagtgtcctg 692
Query: 63 atggttttcttctctggtctcccatcccccatcagccaggctgccaagatgggttttgct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 atggttttcttctctggtctcccatcccccatcagccaggctgccaagatgggttttgct 632
Query: 123 ccagcaactctggaacggcctagagtcattcacatcaaaggccttgcaggcaccggacgg 182
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ccagcaactctggagcggccttgagtcattcacatcaaaggccttgcaggcaccggacgg 572
Query: 183 ttctggcctgggatctcctccaagctgcttgtgacttatctgtctctggattgttctagg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttctggcctgggatctcctccaagctgcttgtgacttatctgtctctggattgttctagg 512
Query: 243 agctgaccccttccaatgtgattctgggatagcctgagatctcatgcaggtgtgcctttc 302
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 511 agctgaccccttccaatgtggttctgggatagcctgagatctcatgcaggtgtgactttc 452
Query: 303 tctggttgttagtagtcacttcttgcattgtgggagtggcaaattcattcctcttacata 362
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tttggttggtagtagtcacttcttgcattgtgggagtggcaaattcattcctcttacata 392
Query: 363 gagccattatctatctgggtatgtccaaaaccacgcttacttaatccagaaatgatgggt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gagccattatctatctgggtatgtccaaaaccacgcttacttaatccagaaatgatgggt 332
Query: 423 tatgttagagagtaaagagggaagaaaagagtagaagctaaagcatcaacagattggact 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tatgttagagagtaaagagggaagaaaagagtagaagctaaagcatcaacagattggact 272
Query: 483 gatcaagagggattggtcctcttaaccaagactgcagctagccaactgagttaaatgaaa 542
|||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 271 gatcaagagggatttgtcttcttaaccaagactgcagctagccaaccgagttaaatgaaa 212
Query: 543 aactataacagtggtcctcatggttgggtgcacatcaaaatcacccaagaactcttaaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aactataacagtggtcctcatggttgggtgcacatcaaaatcacccaagaactcttaaaa 152
Query: 603 agatgccaagactgtcgccaaggccaactaaatcagaagatactggggaaacatgaagct 662
||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 151 agatgccaagactgtcgccaaggccaactaaatcagaagatactgggga------aagct 98
Query: 663 ctgacattttcttgaagct 681
|||||||||||||||||||
Sbjct: 97 ctgacattttcttgaagct 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1082
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1072
Effective search space: 719312
Effective search space used: 719312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_b07.g1 MSMg01no194_b07.g1 CHROMAT_FILE:
MSMg01no194_b07.g1 PHD_FILE: MSMg01no194_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:52 2005
(289 letters)
>mm_chr7_74453192_74453880
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Plus
Query: 1 atgttaaggaaaacaacgtgaatgagtgatcacctttgtaaggaaaagatgaacaggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgttaaggaaaacaacgtgaatgagtgatcacctttgtaaggaaaagatgaacaggtct 260
Query: 61 acggaaatattagactaatatctcattttcttttacaactaaaagtatctgtagcaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acggaaatattagactaatatctcattttcttttacaactaaaagtatctgtagcaaata 320
Query: 121 tgccaggaccgaaattacttccaaataatgaacacaacaatttttgtgccattattctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccaggaccgaaattacttccaaataatgaacacaacaatttttgtgccattattctct 380
Query: 181 atattcaacctttgaaaaaaattttagtgtttttcttcctaagtctatgaaggtacctac 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atattcaacctttgaaaaaaaatttagtgtttttcttcctaagtctatgaaggtacctac 440
Query: 241 atctcaataagcagaaatacatatcaagcagtagaagctgcaggtgatc 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctcaataagcagaaatacatatcaagcagtagaagctgcaggtgatc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
