Query= MSMg01no194_h14.b1 MSMg01no194_h14.b1 CHROMAT_FILE:
MSMg01no194_h14.b1 PHD_FILE: MSMg01no194_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:21 2005
(572 letters)
>mm_chr7_76104956_76105927
Length = 972
Score = 978 bits (506), Expect = 0.0
Identities = 527/534 (98%)
Strand = Plus / Minus
Query: 39 tgtagtacaaaggaattctacccagtagtacaaaggaaccacggttatatgatgctgatt 98
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 972 tgtagtacaaaggaattctacccagtagtacaaaggaataacggttatatgatgctgatt 913
Query: 99 aaagaaaaattattatgctgagcaaattaaacataaaattgttcctaatgtaggattcaa 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 aaagaaaaattattatgctgagcaaattaaacataaaattgttcctaatgtaggattcaa 853
Query: 159 tttacataatattctagaaaatataaaacaatatgtaataatagaaaatgagttacataa 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tttacataatattctagaaaatataaaacaatatgtaataatagaaaatgagttacataa 793
Query: 219 gggatagaggtgtgggaaggcagtaaaaaagaaatctgaaaggcatgagcaatcttttca 278
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gggataaaggtgtgggaaggcagtaaaaaagaaatctgaaaggcatgagcaatcttttca 733
Query: 279 tagcacaatgtgttcattgtcttaattttacagatggctttatttattgtacataaatta 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tagcacaatgtgttcattgtcttaattttacagatggctttatttattgtacataaatta 673
Query: 339 ttcatccacaaactgcataaatatcttaaaaattggaaatcaatgtacaaaaacattcct 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttcatccacaaactgcataaatatcttaaaaattggaaatcaatgtacaaaaacattcct 613
Query: 399 cctttaaaaatggttgttattttataaggtgaccaactacataaatattatgaatatagg 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cctttaaaaatggttgttattttataaggtgaccaactacataaatattatgaatatagg 553
Query: 459 ctaaaagccaaatcaagtatggattcaataacaaatttggtttgggataaataattttac 518
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 552 ctaaaagccaaatcaattatggatccaataacaaatttggtttgggataaataattttac 493
Query: 519 tgttctaaatatttagaacaatattaattacttgatgagtttaaaaaacaataa 572
||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 492 tgttctaaatatttagaaccatatcaattacttgatgagtttaaaaaacaataa 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_h14.g1 MSMg01no194_h14.g1 CHROMAT_FILE:
MSMg01no194_h14.g1 PHD_FILE: MSMg01no194_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:21 2005
(281 letters)
>mm_chr7_76052847_76053527
Length = 681
Score = 522 bits (270), Expect = e-153
Identities = 279/282 (98%), Gaps = 2/282 (0%)
Strand = Plus / Plus
Query: 1 ttattcctgtgatcagggtagtgatcagggaggat-ggctctgatgtgtggctccccaga 59
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 201 ttattcctgtgatcagggtagtgatcagggag-attggctctgatgtgtggctccccaga 259
Query: 60 ttctgactgtcacagcttagctcagacctctcttcatctctccacattttggaatctctc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttctgactgtcacagcttagctcagacctctcttcatctctccacattttggaatctctc 319
Query: 120 tctatatatataatgaagcatagattcatttacctagcgttctgtcatccagaaaactct 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 320 tctatatatataatgaagcatagattcatttacctagcattctgtcatccagaaaactct 379
Query: 180 attaacttttgcatctgttctctgctactattgggataacggatgctcattgttgtgaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attaacttttgcatctgttctctgctactattgggataacggatgctcattgttgtgaca 439
Query: 240 ctgaagccattcaggtgcctttggcatcacacaggatcacat 281
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgaagccattcaggtgcctttggcatcacacaggatcacat 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
