Query= MSMg01no201_k08.b1 MSMg01no201_k08.b1 CHROMAT_FILE:
MSMg01no201_k08.b1 PHD_FILE: MSMg01no201_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:00 2005
(577 letters)
>mm_chr7_61064568_61065544
Length = 977
Score = 911 bits (471), Expect = 0.0
Identities = 519/535 (97%)
Strand = Plus / Minus
Query: 12 gaattcccaggctgaatttgaactattacaaactcctccaactcaacctccttctacatg 71
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||
Sbjct: 535 gaattcccaggctgaatttgaaataatacaaactcctccaactcaacctccttctacttg 476
Query: 72 cttgcatttcatgcctgagcatctgtggtccgttatctgtccagagatggcagcagtgct 131
|||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 475 cttggatttcatgcctgagcatctgtggtctgttatttgtccagagatggcagcagtgct 416
Query: 132 gggatgaataggtgccttgtggctctggttcatccgggaatgctgggagtggtacagctc 191
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 415 gggatgaataggtgccttgacgctctggttcatctgggaatgctgggagtggtacagctc 356
Query: 192 tgagaagagaagcaaggaggtttgggtggcctaagctggcaggtagccaaggtctccagt 251
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 355 tgagaagagaagcaaggaggtttgggtggcctaagctggcaggtagctaaggtctccagt 296
Query: 252 ctctcttctgctactgaatcattgacagggccagtggttgaagcagcagtggtatgatcc 311
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ctttcttctgctactgaatcattgacagggccagtggttgaagcagcagtggtatgatcc 236
Query: 312 tgatcagcccaggtctagtgatgagtgctttgagagagggagctcttccctaaatgttac 371
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 235 tgttcagcccaggtctagtgatgagtgcttcgagagagggagctcttccctaaatgttac 176
Query: 372 agcttgggtaagacaggcactatcagatgatccttggtgcactttatttcatgtggacag 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 agcttgggtaagacaggcactatcagatgatccttggtgcactttatttcatgtggacag 116
Query: 432 ggactatataaacattgaggagtaaggtggaatttaggaggaaatgtttcctattggctc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ggactatataaacattgaggagtaaggtggaatttaggaggaaatgtttcctattggctc 56
Query: 492 gttgtgagatgttagtgatgctctatttgcatgatgaaggactccagatgctcaa 546
|||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 55 gttgtgagatgttagtgatgatctatttgcatgaggaaggactccagatgatcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_k08.g1 MSMg01no201_k08.g1 CHROMAT_FILE:
MSMg01no201_k08.g1 PHD_FILE: MSMg01no201_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:00 2005
(661 letters)
>mm_chr7_60955213_60956276
Length = 1064
Score = 1038 bits (537), Expect = 0.0
Identities = 629/661 (95%), Gaps = 7/661 (1%)
Strand = Plus / Plus
Query: 6 cataaaaccagagacagttgaaacttgtagaggaag-aattggggaaaagtatctcttat 64
|||||||||||| ||||||||||||| |||||| || || ||||| ||||||||||||||
Sbjct: 206 cataaaaccagacacagttgaaacttatagagg-agaaagtgggggaaagtatctcttat 264
Query: 65 tctttcgttcatgtttcgtggtattaaaaacaaa--taaaaagtctatattcttttctgg 122
||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 265 tctttagttcatgttttgtggtattaaaaacaaatttaaaaa-tctatattcttttctgg 323
Query: 123 agtgcaagaataaagtctatctctgttgtccctgtgcacttgcttcatgtgctccaggtc 182
|||||||||| |||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 324 agtgcaagaacaaagtctatctctgttgtccctgtgcacatggttcatgtgcttcaggtc 383
Query: 183 tatggaatagttctgcgagagagcatatctgcgagtgaagctggagccttagagactctc 242
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 catggaatagttctttgagagagcatatctgcgagtcaagctggagccttagagactctc 443
Query: 243 atagtgattacaaac--tgagttattttaagcacaatatatagtactgagagctagctat 300
||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 444 atagtgattacaaacattgagatattttaagcacaatatatagtactgagagctatctat 503
Query: 301 agaactatgtagagcacagacacacttaccagaagtatggggctttggcttttaaaggat 360
||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 504 agaactatgtagagcccagacacaattgccagaagtatggggctttggcttttaaaggat 563
Query: 361 ttacatgaagcaggaaatgcatctttctctgcctgtttagtctcccgagtatttaagtca 420
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 564 ttacatgaagcaggaaatgcatctttctctgcctgttcagtctcctgagtatttaagtca 623
Query: 421 aggatgtcaatacacacttgaggagatgcaatgagcccaaagagggggaatgtaattaac 480
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 624 aggatgtcaatccacacttgaggagatgcaatgagcccacagagggggaatgtaattaac 683
Query: 481 acagctgtgggtgaactttcaaagcacccagtgagtgctttcagaaataaagtggtattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acagctgtgggtgaactttcaaagcacccagtgagtgctttcagaaataaagtggtattc 743
Query: 541 aagattatgatttgacttctatatacttcagcaatgcttctttcaatagatgcaccaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aagattatgatttgacttctatatacttcagcaatgcttctttcaatagatgcaccaaaa 803
Query: 601 aatatgtttggatatttttatcaaaattaaaatgaatgaaaaatatagaacattgaattt 660
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 804 aatatgtttggatatctttatcaaaattaaaatgaatgaaaaataaagaacattgaattt 863
Query: 661 t 661
|
Sbjct: 864 t 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1064
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1054
Effective search space: 686154
Effective search space used: 686154
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
