Query= MSMg01no207_k20.b1 MSMg01no207_k20.b1 CHROMAT_FILE:
MSMg01no207_k20.b1 PHD_FILE: MSMg01no207_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:54 2005
(428 letters)
>mm_chr7_68265252_68266079
Length = 828
Score = 721 bits (373), Expect = 0.0
Identities = 400/409 (97%)
Strand = Plus / Minus
Query: 17 gaattcccattattattgctgttttgtattcccttccaggattttagaattcctctactc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaattcccattattattgctgttttgtattcccttccaggattttagaattcctctactc 566
Query: 77 aagttaaaatacctgtttgacaatcagccagaaagttatgactgtactgaaatgtcaaag 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagttaaaatacctgtttgacaatcagccagaaagttatgactgtactgaaatgtcaaag 506
Query: 137 gttccttctaacatgacactacagagtttaccatatttggaaaccctagtcagtaatcac 196
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttccttctaacatgagaggacagagtttaccatatttggaaaccctagtcagtaatcac 446
Query: 197 ctcatgcaaagttaaagggagtacaaaagttgtctgaccatggaggtgtgttttgggatc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcatgcaaagttaaagggagtacaaaagttgtctgaccatggaggtgtgttttgggatc 386
Query: 257 ttttaatgttgttagatgatttctcctcaataatccagtgagaaatcatccaccttgatt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttaatgttgttagatgatttctcctcaataatccagtgagaaatcatccaccttgatt 326
Query: 317 agaagcacttggacccaattaccttggtatgggtcacataggatagactgcactatattt 376
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 325 agaagcgcttggacccaattaccttgggatgggtcacataggatagactgcactagacac 266
Query: 377 acccaggattggcctatgcggaagtcatccttttgcttaatttattctt 425
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acccaggattggcctatgcggaagtcatccttttgcttaatttattctt 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_k20.g1 MSMg01no207_k20.g1 CHROMAT_FILE:
MSMg01no207_k20.g1 PHD_FILE: MSMg01no207_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:54 2005
(373 letters)
>mm_chr7_68163616_68164388
Length = 773
Score = 654 bits (338), Expect = 0.0
Identities = 364/376 (96%), Gaps = 8/376 (2%)
Strand = Plus / Plus
Query: 1 aaaatggggtataggcatacgtaccactgtctactccttgatgtgttgtgaggtcttatt 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 aaaatggggtataggcatacgtaccactgcctactccttgatgtgttgtgaggtcttatt 260
Query: 61 gatacatatttcttcatgaaggaatgtgataagaaaagtacccaaaa----ttttatttt 116
|||||||||||||||||||||||||||||||||||||||| |||| || | ||||
Sbjct: 261 gatacatatttcttcatgaaggaatgtgataagaaaagta---aaaaaaaattgt-tttt 316
Query: 117 atctttatctaggcagcttatgacaagttaacagataagtaacctgaatgattaagtgta 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atctttatctaggcagcttatgacaagttaacagataagtaacctgaatgattaagtgta 376
Query: 177 actcatgaaggatactcaagagagagaacctgagaacagtcatgcttgtattccttctta 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 actcatgaaggatactcaagagagagaacctgagaacagtcatgcttgtattccttctta 436
Query: 237 ctgttaaactcatattcaaatgaatgcttatgtagtataaaatgatcaatatttataata 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctgttaaactcatattcaaatgaatgcttatgtagtataaaatgatcaatatttataata 496
Query: 297 tcattgatgtaattataatgatagtatattgacagtgacagttttatagatattcactag 356
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 497 tcattgatgtaattataatgatagtatagtgacagtgatagttttatagatattcactag 556
Query: 357 ataggaaatatatgat 372
||||||||||||||||
Sbjct: 557 ataggaaatatatgat 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
