Query= MSMg01no208_o24.b1 MSMg01no208_o24.b1 CHROMAT_FILE:
MSMg01no208_o24.b1 PHD_FILE: MSMg01no208_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:54 2005
(316 letters)
>mm_chr7_97089360_97090075
Length = 716
Score = 592 bits (306), Expect = e-173
Identities = 309/310 (99%)
Strand = Plus / Plus
Query: 4 ggaattccgcagccactgtcctaattgaactcaagaaccttccagaatttgcaggaagga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccgcagccactgtcctaattgaactcaagaaccttccagaatttgcaggaagga 263
Query: 64 acgtgaccctccactacataacaacacaggaacgcatctgggccggcgacctctgaccct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acgtgaccctccactacataacaacacaggaacgcatctgggccggcgacctctgaccct 323
Query: 124 tccttcctaacttgcacgcctctccggaacgagtacttccgggtcattacacccatttcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccttcctaacttgcacgcctctccggaacgagtacttccgggtcattacacccatttcc 383
Query: 184 tccttctaaggtagtaaggaggagctggtatcgcgctaagactacaaatcccatagtgca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tccttctaaggtagtaaggaggagctggtatcgcgctaagactacaaatcccatagtgca 443
Query: 244 gtgcgccagcctcccagagggcgagccgggagaatttgaaagttactactgatagtacgt 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 gtgcgccagcctcccagagggcgagccgggagaatttgaaagttactactgatagtacat 503
Query: 304 gatttccgtg 313
||||||||||
Sbjct: 504 gatttccgtg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no208_o24.g1 MSMg01no208_o24.g1 CHROMAT_FILE:
MSMg01no208_o24.g1 PHD_FILE: MSMg01no208_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:54 2005
(285 letters)
>mm_chr7_97155235_97155919
Length = 685
Score = 470 bits (243), Expect = e-137
Identities = 271/287 (94%), Gaps = 12/287 (4%)
Strand = Plus / Minus
Query: 5 tctcaaactatgagtaacagagctcaaccgtcctctaaggcaggctgaagagatgctccc 64
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tctcaaacaatgagtaacagagctcaaccgtcctctaaggcaggctgaagagatgctccc 426
Query: 65 tgcctaagtctgttcaaagaaattctttaaagaacttagaaaattgtcgaaataaaggtt 124
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 425 tgcctaagtctgttcaaagaaattctttaaagaacttagaaaattgtcgcaataaaggtt 366
Query: 125 tttaaggaggaaggctaagaaagcccagagcaagattagtggatttgggaaagtagcagc 184
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tttaaggaggaaggctatgaaagcccagagcaagattagtggatttgggaaagtagcagc 306
Query: 185 tgcagcccgctggttcaggacccctctgcccacagtaggtcaggcatctggaggtttgtt 244
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 305 tgcagcccgctggttcaggacccctctgcctacagtaggtcaggcatctggaggtttgtt 246
Query: 245 ta------tttttttctttctataaaatcctaagaggtactcatctg 285
|| |||||||||||||||||||||||||||||||||
Sbjct: 245 taacagac------tctttctataaaatcctaagaggtactcatctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
