Query= MSMg01no209_o10.b1 MSMg01no209_o10.b1 CHROMAT_FILE:
MSMg01no209_o10.b1 PHD_FILE: MSMg01no209_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:12 2005
(312 letters)
>mm_chr7_116714834_116715546
Length = 713
Score = 534 bits (276), Expect = e-156
Identities = 297/304 (97%), Gaps = 1/304 (0%)
Strand = Plus / Plus
Query: 5 gaattctcagcacgctctacttctttcttccagggcaagctgtcacggaagggcagatgt 64
|||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||
Sbjct: 205 gaattctcagcacgctctgcttctttcttccagggcaggccgtcacggaagggcagatgt 264
Query: 65 gtgcggaaggactagacactcaattatatttagaaataggatggaagacatgtttctttc 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgcggaaagactagacactcaattatatttagaaataggatggaagacatgtttctttc 324
Query: 125 ctttatgaatctctagtgctgggagagatggctccactgctctg-actgctatgttgtca 183
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 325 ctttatgaatctctagtgctgggagagatggctccactgctctggactgctattttgtca 384
Query: 184 ctaacacgaacagagagacaactagtgaggagggaagatgaggctaaccctaaaatttgg 243
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 ctaacacgaacagagagacaactagtgaggagggaagatgaagctaaccctaaaatttgg 444
Query: 244 ctgaaagaaaatcctgtaacaaaggaagaagcaggtgcaagctcttctccatcctttttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgaaagaaaatcctgtaacaaaggaagaagcaggtgcaagctcttctccatcctttttt 504
Query: 304 tttt 307
||||
Sbjct: 505 tttt 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no209_o10.g1 MSMg01no209_o10.g1 CHROMAT_FILE:
MSMg01no209_o10.g1 PHD_FILE: MSMg01no209_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:12 2005
(289 letters)
>mm_chr7_116831970_116832658
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%)
Strand = Plus / Minus
Query: 1 gtgactgcctgggctgtctatgactttttaccttggcttcaaagccctgttgacttcact 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 585 gtgactgcctgggctgtctatgactttttaccttggcttcgaagccctgttgacttcact 526
Query: 61 gagtgctgggattaaaggcgtgcgccaccaccgcccacctcaaccccacaattcttaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gagtgctgggattaaaggcgtgcgccaccaccgcccacctcaaccccacaattcttaatg 466
Query: 121 tacctcaatttctaggacttctagctgcatagagaaaatggagactaggaaacccaaaga 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tacctcaatttctaggacttgtagctgcatagagaaaatggagactaggaaacccaaaga 406
Query: 181 agcaaggtgacaccagcagataactgatcttggctctttttctcaatcaacaaactacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agcaaggtgacaccagcagataactgatcttggctctttttctcaatcaacaaactacta 346
Query: 241 ttagcatcctctcaggcattgaattccccctagcctccctaaagttctg 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttagcatcctctcaggcattgaattccccctagcctccctaaagttctg 297
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
