Query= MSMg01no213_n16.b1 MSMg01no213_n16.b1 CHROMAT_FILE:
MSMg01no213_n16.b1 PHD_FILE: MSMg01no213_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:00 2005
(318 letters)
>mm_chr7_35036686_35037403
Length = 718
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 5 gaattccacagatgatctcaagtgcaaggtcacagtgaaaattcagagcaccacaaatac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacagatgatctcaagtgcaaggtcacagtgaaaattcagagcaccacaaatac 264
Query: 65 tatgtaatactatgcaaaaccagcactggcctagggcacagcagtctgaaacacaggtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatgtaatactatgcaaaaccagcactggcctagggcacagcagtctgaaacacaggtga 324
Query: 125 tcatgtatttacacttcattctcacaatacctcatcatacccatgggcaaatactttcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcatgtatttacacttcattctcacaatacctcatcatacccatgggcaaatactttcaa 384
Query: 185 aacaaaaccaaaacggctggaatcggaaatacttctggtctctagcatttcatgtcagac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacaaaaccaaaacggctggaatcggaaatacttctggtctctagcatttcatgtcagac 444
Query: 245 acttgatcttggctttccaagagaaaaaacaaaacaaaagaaaacctcaaagcaaaaacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acttgatcttggctttccaagagaaaaaacaaaacaaaagaaaacctcaaagcaaaaacc 504
Query: 305 aatttttatcatta 318
||||||||||||||
Sbjct: 505 aatttttatcatta 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_n16.g1 MSMg01no213_n16.g1 CHROMAT_FILE:
MSMg01no213_n16.g1 PHD_FILE: MSMg01no213_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:00 2005
(287 letters)
>mm_chr7_35135571_35136257
Length = 687
Score = 534 bits (276), Expect = e-156
Identities = 285/288 (98%), Gaps = 2/288 (0%)
Strand = Plus / Minus
Query: 1 caagacagccagagccacatagtgagacttgtctcaaagaaaaagaataatatattaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 caagacagccagagccacatagtgagacttgtctcaaagaaaaagaataatatattaagt 436
Query: 61 aattaaatcgtattggactaagcagtagctggagtgctgcctgaagcctaactgctcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aattaaatcgtattggactaagcagtagctggagtgctgcctgaagcctaactgctcttt 376
Query: 121 cagccaaaggaaggaagaataggaaggtgacggtttgtctttttattagagccatgagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cagccaaaggaaggaagaataggaaggtgacggtttgtctttttattagagccatgagtc 316
Query: 181 tagatatcatgaaccaggaaaatctcttaaacactccctccacacaagaaaaaaggatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tagatatcatgaaccaggaaaatctcttaaacactccctccacacaagaaaaaaggatga 256
Query: 241 tctgctatgccaagcgtggtggcgca-agcctttaattccagcacttg 287
|||||||||||||||||||||||||| | |||||||| ||||||||||
Sbjct: 255 tctgctatgccaagcgtggtggcgcaca-cctttaatcccagcacttg 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
