Query= MSMg01no215_p05.b1 MSMg01no215_p05.b1 CHROMAT_FILE:
MSMg01no215_p05.b1 PHD_FILE: MSMg01no215_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:44 2005
(194 letters)
>mm_chr7_76856096_76856689
Length = 594
Score = 360 bits (186), Expect = e-104
Identities = 192/194 (98%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 1 accaggagtagaacaacatttgggatgtatataaatagcatatttttttaataaaagaat 60
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 202 accaggagtaggacaacatttgggatgtatataaatagcatatttttt-aataaaagaat 260
Query: 61 taattattttggataccttacatttattcaataattcttactgttaattttttaaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taattattttggataccttacatttattcaataattcttactgttaattttttaaaaatt 320
Query: 121 tgacatgaggacatttaaaaacttgacaaaactttagggaaaaggttttaactttaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacatgaggacatttaaaaacttgacaaaactttagggaaaaggttttaactttaggaa 380
Query: 181 cttgcaaatacggg 194
||||||||||||||
Sbjct: 381 cttgcaaatacggg 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no215_p05.g1 MSMg01no215_p05.g1 CHROMAT_FILE:
MSMg01no215_p05.g1 PHD_FILE: MSMg01no215_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:45 2005
(248 letters)
>mm_chr7_76957684_76958331
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Minus
Query: 1 tctacttcaagaataatctgcttacatcgttaagacctcagctaagctcgccaacacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tctacttcaagaataatctgcttacatcgttaagacctcagctaagctcgccaacacaaa 389
Query: 61 ttaccagatgttgtatcccctagtttttccatcaaaagaccaaccgccaagcttgttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttaccagatgttgtatcccctagtttttccatcaaaagaccaaccgccaagcttgttgaa 329
Query: 121 agagaaaggtcattgtccctccctgactataaaactaattttttgcacctcctaacaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agagaaaggtcattgtccctccctgactataaaactaattttttgcacctcctaacaaac 269
Query: 181 gaaataggaatacctttcagctgtagaaggaacctgtctccctccttccaagttcccctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gaaataggaatacctttcagctgtagaaggaacctgtctccctccttccaagttcccctg 209
Query: 241 tttggctt 248
||||||||
Sbjct: 208 tttggctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
