Query= MSMg01no231_g01.b1 MSMg01no231_g01.b1 CHROMAT_FILE:
MSMg01no231_g01.b1 PHD_FILE: MSMg01no231_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:39 2005
(316 letters)
>mm_chr7_91911737_91912453
Length = 717
Score = 522 bits (270), Expect = e-152
Identities = 303/314 (96%), Gaps = 3/314 (0%)
Strand = Plus / Minus
Query: 5 gaattcccaaaacacacagaatcacttagaggtgtcagagaaagaaaagacatacatccc 64
||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 517 gaattcccagaacacacagaaccactcagaggtgtcagagaaagaaaagacatacatccc 458
Query: 65 aagacatatctcaccgcttgtaaaaacttatcttgagcagcaatcactggaagaactaac 124
|||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 457 aagacatatctcactg-ttgtaaaaacttatcttgagcagcaatcacaggaagaactaac 399
Query: 125 caagagccacttggcctgccttcctacatgcacagagccaaacaagtctctctttttcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caagagccacttggcctgccttcctacatgcacagagccaaacaagtctctctttttcct 339
Query: 185 gtgctttt-attagtgtctattaattgaacacatagtggg-tttcaccctgataatctca 242
||| |||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 338 gtggtttttattagtgtctattaattgaacacatagtggggtttcactctgataatctca 279
Query: 243 tatatgcatatagtgtgtgtcaactatagtccacctcaatattcttgcatccctcatttc 302
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 278 tatatgcatatagtgtgtgtcaactatagtccacctcaatattcttgcattcctcatttc 219
Query: 303 cctgtttcccttct 316
||||||||||||||
Sbjct: 218 cctgtttcccttct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 717
Length adjustment: 9
Effective length of query: 307
Effective length of database: 708
Effective search space: 217356
Effective search space used: 217356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_g01.g1 MSMg01no231_g01.g1 CHROMAT_FILE:
MSMg01no231_g01.g1 PHD_FILE: MSMg01no231_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:39 2005
(231 letters)
>mm_chr7_91802280_91802910
Length = 631
Score = 424 bits (219), Expect = e-123
Identities = 228/231 (98%)
Strand = Plus / Plus
Query: 1 gacatatgtataaccctcttcagtccatgctccccacaataagtaaatgaatgtaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacatatgtataaccctcttcagtccatgctccccacaataagtaaatgaatgtaagaaa 260
Query: 61 actgaagcagagtgctcttcagtggtattattgcccttatctttaaattctagccttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgaagcagagtgctcttcagtggtattattgcccttatctttaaattctagccttatt 320
Query: 121 ccttattcttcatccagcatgggatggaggcagatgcagagacccacagccaaacatgag 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttattcttcatccagcaggggatggaggcagatgcagagacccacagccaaacatgag 380
Query: 181 gctgtggaagagttgttgatgaaattgggcaaactggaggggtcaaggaca 231
||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgtggaagagttggggatgaaattgggcaaactggaggggtcaaggaca 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
