Query= MSMg01no237_n11.b1 MSMg01no237_n11.b1 CHROMAT_FILE:
MSMg01no237_n11.b1 PHD_FILE: MSMg01no237_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:46 2005
(663 letters)
>mm_chr7_121674035_121675096
Length = 1062
Score = 1224 bits (633), Expect = 0.0
Identities = 651/657 (99%), Gaps = 1/657 (0%)
Strand = Plus / Minus
Query: 5 gaattctctaaggggccagggccctgagctgatcttcccctttccacagcacagtgacta 64
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 860 gaattctctaagggg-aagggccctgagctgatcttcccctttccacagcacactgacta 802
Query: 65 aataaatatggcatctttaatagatattttggggataaggaatgatttgtcaaacagaag 124
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aataaatacggcatttttaatagatattttggggataaggaatgatttgtcaaacagaag 742
Query: 125 aaaagagacactgctcttctgctagtttagcagcacaaaggtgtggcaatataggcgtaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaagagacactgctcttctgctagtttagcagcacaaaggtgtggcaatataggcgtaa 682
Query: 185 actgacatcttagaaatgcaactttaattccataaaatgtctcacttggtactaagtaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actgacatcttagaaatgcaactttaattccataaaatgtctcacttggtactaagtaac 622
Query: 245 tcaaaatctgctataaacactttggatataattatttggtttgttactatttgaaaaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcaaaatctgctataaacactttggatataattatttggtttgttactatttgaaaaaaa 562
Query: 305 taaaattcatctatttatcaaaagaaagcatagcaagcaacagtattttaagacatattg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaaattcatctatttatcaaaagaaagcatagcaagcaacagtattttaagacatattg 502
Query: 365 acataataataaagtttatttaaactagtacaataatattatttaatatcagctattctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acataataataaagtttatttaaactagtacaataatattatttaatatcagctattctt 442
Query: 425 acatcaggtgtaatgttaacattaaaattcacttttcacctatagcactaacaacatatt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatcaggtgtaatgttaacattaaaattcacttttcacctatagcactaacaacatatt 382
Query: 485 tccctttttaaaatcaggcactactttacataacaaaccttggcattgaattctgcaagg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccctttttaaaatcaggcactactttacataacaaaccttggcattgaattctgcaagg 322
Query: 545 aaatcaaaatgttttttgagatctgtagcaaggattgcttctataactaaaaatcgaaac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatcaaaatgttttttgagatctgtagcaaggattgcttctataactaaaaatcgaaac 262
Query: 605 cgcttgaattccatgtgatcaaggttaaggaggaagttgtattctgggcgagaaaga 661
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 cgcttgaattccatgtgatcaaggttaaggaggaagttgtactctgggcgagaaaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1062
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1052
Effective search space: 686956
Effective search space used: 686956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_n11.g1 MSMg01no237_n11.g1 CHROMAT_FILE:
MSMg01no237_n11.g1 PHD_FILE: MSMg01no237_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:46 2005
(654 letters)
>mm_chr7_121604636_121605689
Length = 1054
Score = 1249 bits (646), Expect = 0.0
Identities = 652/654 (99%)
Strand = Plus / Plus
Query: 1 attttggcaaactcatttattttcactattagtatgtgtgttccttaatgagatgataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttggcaaactcatttattttcactattagtatgtgtgttccttaatgagatgataat 260
Query: 61 atgaaaaaaatgttatccagatttcttttctgaaatgatcttaatttttattcattagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgaaaaaaatgttatccagatttcttttctgaaatgatcttaatttttattcattagat 320
Query: 121 tttaagctttgttagtcattaaaaagtaaggggttttatgagaaggatgtagaatttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaagctttgttagtcattaaaaagtaaggggttttatgagaaggatgtagaatttttc 380
Query: 181 ttgaaattaaactcatggcaattatgacaggaagactataagatacagttataatggaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaaattaaactcatggcaattatgacaggaagactataagatacagttataatggaac 440
Query: 241 aagaaattaagaacatgcttgtcttcaagcacattggctaaacaaagtaacatccaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaaattaagaacatgcttgtcttcaagcacattggctaaacaaagtaacatccaagat 500
Query: 301 tatcatttagaggtctgaagcatagctggggtagggaaaataggaaataataataaaatc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 tatcatttagaggtctgaagcatagctggggtagggaaaataggaaataataataaaacc 560
Query: 361 caagaaagaaacaggaagcaaatagggacaaaaaggactttgcagtgcattgcatcaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 caagaaagaaacaggaagcaaatagggacaaaaaggactttgcagtgcattgcatcagga 620
Query: 421 aagtatcatttgtgcttgttggccatagaagattctaaatattgtggaagccaagtcaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtatcatttgtgcttgttggccatagaagattctaaatattgtggaagccaagtcaag 680
Query: 481 aagccaagtcaaactttgtcctagcccccttctgtcaaacatagggtgacaaatttgtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagccaagtcaaactttgtcctagcccccttctgtcaaacatagggtgacaaatttgtct 740
Query: 541 catctattgttttctgaaatatggtattcatgtttgaaatgtgccattgtggaacaaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catctattgttttctgaaatatggtattcatgtttgaaatgtgccattgtggaacaaagt 800
Query: 601 tcatttctgacgtaatgagtctgaccttcctcattttgtggcatttctgttttc 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcatttctgacgtaatgagtctgaccttcctcattttgtggcatttctgttttc 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
