Query= MSMg01no261_b24.b1 MSMg01no261_b24.b1 CHROMAT_FILE:
MSMg01no261_b24.b1 PHD_FILE: MSMg01no261_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:26 2005
(619 letters)
>mm_chr7_103149463_103150481
Length = 1019
Score = 1015 bits (525), Expect = 0.0
Identities = 534/537 (99%)
Strand = Plus / Minus
Query: 82 tatttgtttttatacagggtatcactgagttgcccaggctgatcacagattcactgtgta 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 tatttgtttttatacagggtatcactgagttgcccaggctgatcacagattcactgtgta 960
Query: 142 gtccatgtaggccttgaaattgagatgccctgtctcaacctcctgagtagctgagttgat 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 gtccatgtaggccttgaaattgagatgccctgtctcaacctcctgagtagctgagttgat 900
Query: 202 aagcttggtcctgtagtggcagctactcttctcttcatcctcttcctctttttcttcccc 261
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 899 aagcttggtcctgtagtggcagctactcttctcttcatcctcttcctccttttcttcccc 840
Query: 262 cacttcctttctttcttctccccatttcaggatttcctctttcatcttccacagtaagga 321
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 839 cacttcctttctttcttctccccatttcagtatttcctctttcatcttccacagtaagga 780
Query: 322 ccaaattgctcactgagacattagtgacatagacacttcacagttctttgccagtcactt 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ccaaattgctcactgagacattagtgacatagacacttcacagttctttgccagtcactt 720
Query: 382 gggtcacatggttattctgttccaccagggcacgtgattcaggttgaaccccttaacccc 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gggtcacatggttattctgttccaccagggcacgtgattcaggttgaaccccttaacccc 660
Query: 442 ttaacatgatggttctagagcctgcagaggtccttactcttcacctgttcccagtgtgga 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ttaacatgatggttctagagcctgcagaggtccttactcttcacctgttcccagtgtgga 600
Query: 502 caaatgactattgagaatagaagtagaagctataacttcaatggcagagggtgaacctag 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 caaatgactattgagaatagaagtagaagctataacttcaatggcagagggtgaacctag 540
Query: 562 gaggcttccttgagtaagtcatttctgagctggactatggaggacttctctaggcat 618
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 539 gaggcttccttgagtaagtcgtttctgagctggactatggaggacttctctaggcat 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_b24.g1 MSMg01no261_b24.g1 CHROMAT_FILE:
MSMg01no261_b24.g1 PHD_FILE: MSMg01no261_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:26 2005
(536 letters)
>mm_chr7_103026354_103027289
Length = 936
Score = 998 bits (516), Expect = 0.0
Identities = 532/538 (98%), Gaps = 2/538 (0%)
Strand = Plus / Plus
Query: 1 catcttatccaatttagttgttttatctttgcattgacaattaatcatttagtgtgatta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 catcttatccaatttagttgttttatctttgcattgacaattaatcatttagtgtgattg 258
Query: 61 ttaatgtaattaattattggctagatatctactaatgtgctgttttctgactaatctatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttaatgtaattaattattggctagatatctactaatgtgctgttttctgactaatctatt 318
Query: 121 cttaatctgtttttcctgcctttttttcccctgaactaattgaatgttttgtgattcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttaatctgtttttcctgcctttttttcccctgaactaattgaatgttttgtgattcagt 378
Query: 181 tttactggttacttaataataactatttgttttattatcttaacaagtgctttaaaatca 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 379 tttactggttacttaataataactatgtgttttattatcttaacaagtgctttaaaatca 438
Query: 241 --cacacacacacacacacacacacacacacacacacacacacactttgtagctgtggct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tacacacacacacacacacacacacacacacacacacacacacactttgtagctgtggct 498
Query: 299 agcctggaactcactaagtagaacaggctggctccacactcactagagatctgcttgtct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agcctggaactcactaagtagaacaggctggctccacactcactagagatctgcttgtct 558
Query: 359 ctacctcccacattcgaggactaaaggccaccctgggccatgtgctaccatgactagtcc 418
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctacctcccacatgcgaggactaaaggccaccctgggccatgtgctaccatgactagtcc 618
Query: 419 tagaacaaacctttgtcacaatcattcttcaggttacatttcatttcatccagtataagg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tagaacaaacctttgtcacaatcattcttcaggttacatttcatttcatccagtataagg 678
Query: 479 tattttcttcacatctctttattcacaatgtcatatttttcttcaagtgtgtctcggt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 679 tattttcttcacatctctttattcacaatgtcatatttttcttcaagtgtgtcccggt 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
