Query= MSMg01no262_b03.b1 MSMg01no262_b03.b1 CHROMAT_FILE:
MSMg01no262_b03.b1 PHD_FILE: MSMg01no262_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:37 2005
(678 letters)
>mm_chr7_101880917_101881995
Length = 1079
Score = 1266 bits (655), Expect = 0.0
Identities = 670/675 (99%), Gaps = 1/675 (0%)
Strand = Plus / Plus
Query: 5 gaattctttattcagctctgtaccccattttttaatggtgttatttgaatttctggattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttattcagctctgtaccccattttttaatggtgttatttgaatttctggattt 264
Query: 65 cagcttctttagctctgacattcacatttataagccaagtgctttatacactgagtcatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagcttctttagctctgacattcacatttataagccaagtgctttatacactgagtcatc 324
Query: 125 atgctagcactcaaatatttactttaaaagcaaagatgacttttcatcaactctaagact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgctagcactcaaatatttactttaaaagcaaagatgacttttcatcaactctaagact 384
Query: 185 tattagagatacctaacttagccataaagggtttctgtttaaaatagaaatacgtaaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tattagagatacctaacttagccataaagggtttctgtttaaaatagaaatacgtaaata 444
Query: 245 aatagacaaaagatagatagatgacattatcctctcctaataatcttaataattattaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatagacaaaagatagatagatgacattatcctctcctaataatcttaataattattaat 504
Query: 305 taatctaactattgaaatgctacaggttcttcataaaatctagttcttgtctccctttaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taatctaactattgaaatgctacaggttcttcataaaatctagttcttgtctccctttaa 564
Query: 365 tttagaagccaggccatttgataatacagttgtgcatctacagattaaaatgctaatgaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttagaagccaggccatttgataatacagttgtgcatctacagattaaaatgctaatgaa 624
Query: 425 tggcaagctagagctttttttt-cttgaaaaacattcctttcctttcttgatgtgcattg 483
|||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||
Sbjct: 625 tggcaagctagagctttttttttcttgaaaaacattcttttccttttttgatgtgcattg 684
Query: 484 aaaatattcattccaccatagtcattttgtttaaaactctgtaactttgaccttacaaag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaaatattcattccaccatagtcattttgtttaaaactctgtaactttgaccttacaaag 744
Query: 544 tcaatgttgtagtttgtatgccgtgtatttggcaagaaatgatgtcccaagcgctgaagc 603
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 745 tcaatgttgtagtttgtatgccgtgtatttggcaagaaatgaggtcccaagcactgaagc 804
Query: 604 aaatctttctctgtctcccttgatctatttttccaaccctcaagaaaatgatttgtgtat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaatctttctctgtctcccttgatctatttttccaaccctcaagaaaatgatttgtgtat 864
Query: 664 ttgactcccccagtt 678
|||||||||||||||
Sbjct: 865 ttgactcccccagtt 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1079
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1069
Effective search space: 714092
Effective search space used: 714092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_b03.g1 MSMg01no262_b03.g1 CHROMAT_FILE:
MSMg01no262_b03.g1 PHD_FILE: MSMg01no262_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:37 2005
(436 letters)
>mm_chr7_102018125_102018958
Length = 834
Score = 812 bits (420), Expect = 0.0
Identities = 430/434 (99%), Gaps = 2/434 (0%)
Strand = Plus / Minus
Query: 1 ctggaagaaatagttttctggaaccatagattctttttttttttttaaacaacaacaaag 60
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 632 ctggaagaaataggtttctggaaccatagattc--tttttttttttaaacaacaacaaag 575
Query: 61 aaaataaaaaacagagaaagaacacattacttgccattcatgttgaatattctattatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aaaataaaaaacagagaaagaacacattacttgccattcatgttgaatattctattatct 515
Query: 121 tcttccctagaacacacatattctgagtctcaatattttgagctaaggctatatcagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tcttccctagaacacacatattctgagtctcaatattttgagctaaggctatatcagact 455
Query: 181 gttctttctccagatattgagtttagcttccatgttcatacaagaaaatttagtttttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gttctttctccagatattgagtttagcttccatgttcatacaagaaaatttagtttttcc 395
Query: 241 tgtctttctctttccttttgcccccactacattatgttctgaatgtccttagaatattga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgtctttctctttccttttgcccccactacattatgttctgaatgtccttagaatattga 335
Query: 301 cacatacaatatatttttcaaatataagagatagcataattttatttcattcaaaaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 334 cacatacaatatatttttcaaatataagagatagcataattttatttcatttaaaaaaat 275
Query: 361 acagacctgtattcaaatagatatactatgctaccatgcctggcttcaggcttgtctggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 acagacctgtattcaaatagatatactatgctaccatgcctggcttcaggcttgtctggg 215
Query: 421 agaccttaaccctt 434
||||||||||||||
Sbjct: 214 agaccttaaccctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 834
Length adjustment: 9
Effective length of query: 427
Effective length of database: 825
Effective search space: 352275
Effective search space used: 352275
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
