Query= MSMg01no263_c11.b1 MSMg01no263_c11.b1 CHROMAT_FILE:
MSMg01no263_c11.b1 PHD_FILE: MSMg01no263_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:59 2005
(345 letters)
>mm_chr7_126149606_126150350
Length = 745
Score = 582 bits (301), Expect = e-170
Identities = 334/349 (95%), Gaps = 8/349 (2%)
Strand = Plus / Minus
Query: 1 tttggatcaaggtgtggaattctcagctcctccagccccatgtctgcctaccccagtcaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 486 tttggatcaaggtgtggaattctcagctcctccagccccatgtctgcctaagacagtcaa 427
Query: 61 agtgttcaaccaccacaacagaaagcaaacaatggcagatgaatcaggcagaggcataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agtgttcaaccaccacaacagaaagcaaacaatggcagatgaatcaggcagaggcataca 367
Query: 121 tgaaggccaatggagaatattaaaatcttagagatttgttttcctttttagtcacaagag 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 366 tgaaggccaatggagaatattaaaatcttagagattttttttcctttttagtcacaagag 307
Query: 181 gtctagctgcaccagaggatataacacattcaatttttattttgttttattttgtactag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gtctagctgcaccagaggatataacacattcaatttttattttgttttattttgtactag 247
Query: 241 gaatgaaacccttagtctgtgcatgctaggaaagtgctctaccactgagttattttc--- 297
||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 246 gaatgaaacccaaagtctgtgcatgctaggaaagtgttctaccactgagtta----caac 191
Query: 298 -ccagtccacactggagaatctaaaaagatgctgtgtgccccactatca 345
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cccagtccacactggagaatctaaaaagatgctgtgtgccccactatca 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_c11.g1 MSMg01no263_c11.g1 CHROMAT_FILE:
MSMg01no263_c11.g1 PHD_FILE: MSMg01no263_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:59 2005
(643 letters)
>mm_chr7_126018174_126019216
Length = 1043
Score = 1176 bits (608), Expect = 0.0
Identities = 635/644 (98%), Gaps = 1/644 (0%)
Strand = Plus / Plus
Query: 1 tctttgctaacgtttgttttatctgtttacagaagagtcactgggatgggtggggagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttgctaacgtttgttttatctgtttacagaagagtcactgggatgggtggggagcca 260
Query: 61 aggggacatgctggtgtgaagggaagttttttaatcgtcaagaaagaacaacagcccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggggacatgctggtgtgaagggaagttttttaatcgtcaagaaagaacaacagcccatg 320
Query: 121 gggaaatgtgggcagcagccatgtttcactttgccctcatagtggcattgcctttctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaatgtgggcagcagccatgtttcactttgccctcatagtggcattgcctttctccc 380
Query: 181 tctcattcctataatgcccagcaagtctgagtgccaagccctttggaattctgctgagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctcattcctataatgcccagcaagtctgagtgccaagccctttggaattctgctgagaa 440
Query: 241 gaaggctctgtgccctctagggctgcttccttcagtggcttccctcactttctctcttga 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaggccctgtgccctctagggctgcttccttcagtggcttccctcactttctctcttga 500
Query: 301 tcatctacactggctttctccctatttatgtatgggtacatgcgcgtcgtgcacattgtg 360
|||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 501 tcatctacacaggctttctccctatttatgtatgggtacatgtgtgtcgtgcacattgtg 560
Query: 361 tggaggcctgaggttggtgtcagggatcatcttcctatcactcttgcagattcttcattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggaggcctgaggttggtgtcagggatcatcttcctatcactcttgcagattcttcattg 620
Query: 421 aggagggtctctcaatcgaacccagagctcattgatgcagccttgctagcccacttgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggagggtctctcaatcgaacccagagctcattgatgcagccttgctagcccacttgctt 680
Query: 481 acttgctctggggatcctgtctcctccatcagagactggagttacaggtgggctgccgta 540
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 681 acttgctctggggatcctgtctcctccgtcagaggctggagttacaggtgggctgccgta 740
Query: 541 gccacctggcattgacatgggttctgaattctgctctttatacttgcaggacagagctgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gccacctggcattgacatgggttctgaattctgctctttatacttgcaggacagagctgt 800
Query: 601 aaccattccatagcctcctgtttgtttggctggttttt-ctggt 643
|||||||||||||||||||||||||||| ||| ||||| |||||
Sbjct: 801 aaccattccatagcctcctgtttgtttgtctgtttttttctggt 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
