Query= MSMg01no267_m06.b1 MSMg01no267_m06.b1 CHROMAT_FILE:
MSMg01no267_m06.b1 PHD_FILE: MSMg01no267_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:54 2005
(317 letters)
>mm_chr7_62300583_62301299
Length = 717
Score = 532 bits (275), Expect = e-155
Identities = 302/315 (95%), Gaps = 8/315 (2%)
Strand = Plus / Plus
Query: 5 gaattctaccatctctcatgcaaaacaatgtcaatgtgttttatcgatcactttgattta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaccatctctcatgcaaaacaatgtcaatgtgttttatcgatcactttgattta 264
Query: 65 taatatactatatgataatctggtatatgtttattgtataaaagaaaacacagacatgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taatatactatatgataatctggtatatgtttattgtataaaagaaaacacagacatgaa 324
Query: 125 gtgagactgtatatttgggtgaaacagagatgaactgttattattttttgttatttgatt 184
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgacactgtatatttgggtgaaacagagatgaactgttattattttttgttatttgatt 384
Query: 185 ttgatttttttaaaattaggtattttcttcatttacatttcaaatgctaccccaaaagta 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 ttgattttttaaaaattaggtattttcttcatttacatttcaaatgctacccccaaagta 444
Query: 245 ccccagaccctcccccccactcccctaaccaccctttt----ccacttcttggccctggt 300
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 445 ccccagaccctccccctcactcccctacccaccc----acacccacttcttggccctggt 500
Query: 301 gttcacccttactga 315
|||||||||||||||
Sbjct: 501 gttcacccttactga 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_m06.g1 MSMg01no267_m06.g1 CHROMAT_FILE:
MSMg01no267_m06.g1 PHD_FILE: MSMg01no267_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:54 2005
(289 letters)
>mm_chr7_62485236_62485926
Length = 691
Score = 458 bits (237), Expect = e-133
Identities = 264/281 (93%), Gaps = 15/281 (5%)
Strand = Plus / Minus
Query: 1 attagaaagcacaaacaatctagattccta--tttttttaattggatttaccattatcct 58
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 381 attagaaagcacaaacaatctagattcctatttttttttaattggatttaacattatcct 322
Query: 59 ttagcatattcaattaatgcatttcaggaaaaatcgataacaacttacatcactgtgtca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagcatattcaattaatgcatttcaggaaaaatcgataacaacttacatcactgtgtca 262
Query: 119 cacttgataagtgtattatctgggaaaaaacatggtgaacagggcctagctacttctttg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacttgataagtgtattatctgggaaaaaacatggtgaacagggcctagctacttctttg 202
Query: 179 tacatacacatact------------acacacacacacacacacacacacacacaccaca 226
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tacatacacatactacacacacacacacacacacacacacacacacacacacacaccaca 142
Query: 227 ctcacaagcacataccacacacacacacacacacacacaca 267
|||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 141 ctcacaagcacataccacacacacacacac-cacactcaca 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 107
Number of extensions: 34
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 691
Length adjustment: 9
Effective length of query: 280
Effective length of database: 682
Effective search space: 190960
Effective search space used: 190960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
