Query= MSMg01no268_b05.b1 MSMg01no268_b05.b1 CHROMAT_FILE:
MSMg01no268_b05.b1 PHD_FILE: MSMg01no268_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:17 2005
(321 letters)
>mm_chr7_83083462_83084182
Length = 721
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%)
Strand = Plus / Minus
Query: 5 gaattccaagctagaaatatatctaaataccaggtctgtctttttaggcaagatatttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaattccaagctagaaatatatctaaataccaggtctgtctttttaggcaagatatttaa 552
Query: 65 ctgtttgaatctcagtttccttgtctataaatatgcctcgtcggctttccaggaggacca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctgtttgaatctcagtttccttgtctataaatatgcctcgtcggctttccaggaggacca 492
Query: 125 acatctaaaatgatagacacagctcctggtgcacaatggtagtaatcaatgctcttccca 184
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 491 acatctaaaatgatagacacagctcctggtgcacaacggtagtaatcaatgctctgccca 432
Query: 185 gatgctcccaaacttacctgcccacccacccatctaggcctgctgcctctgccaccaggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gatgctcccaaacttacctgcccacccacccatctaggcctgctgcctctgccaccaggc 372
Query: 245 agtaccactgagcaggcagactccctgtcctgagtcaccagctacagtgacttttccagc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cgtaccactgagcaggcagactccctgtcctgagtcaccagctacagtgacttttccagc 312
Query: 305 cagctgcggtggaaac 320
||||||||||||||||
Sbjct: 311 cagctgcggtggaaac 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_b05.g1 MSMg01no268_b05.g1 CHROMAT_FILE:
MSMg01no268_b05.g1 PHD_FILE: MSMg01no268_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:18 2005
(294 letters)
>mm_chr7_82952206_82952899
Length = 694
Score = 474 bits (245), Expect = e-138
Identities = 284/301 (94%), Gaps = 7/301 (2%)
Strand = Plus / Plus
Query: 1 ctctcctgctctaagaacacatgcacagatggccatgggcaacctctga-------ccca 53
|||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||
Sbjct: 194 ctctccggctctaagaacacatgcacagatggccatggacaacccctgacccagctccca 253
Query: 54 gcagcctctcggacttctagacttctcaggacttctagactgccattggaatccaggaat 113
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 254 gcagcctctcggacttttagacttcttgggacttctagactgccattggaatccaggaat 313
Query: 114 gcttccttggacattccacagaggttttcctaaaacggtcagaagagggcgcccttttgc 173
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 314 gcttccttggacattccacagaggttttcctaaaacggtcagaagggggcgcccttttgc 373
Query: 174 ctcagccctgcgtcctgtgtcttcccttatttgcacttccccaagataccccctgcttcc 233
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctcagtcctgcgtcctgtgtcttcccttatttgcacttccccaagataccccctgcttcc 433
Query: 234 ggggagttgagggattggggacatagagagttttagtgtctgatagggtgaggaaggtgg 293
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 434 ggggagttgagggattggggacatagagggtgttagtgtctgatagggtgaggaaggtgg 493
Query: 294 g 294
|
Sbjct: 494 g 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
