Query= MSMg01no268_c18.b1 MSMg01no268_c18.b1 CHROMAT_FILE:
MSMg01no268_c18.b1 PHD_FILE: MSMg01no268_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:24 2005
(319 letters)
>mm_chr7_3509419_3510137
Length = 719
Score = 557 bits (288), Expect = e-163
Identities = 300/304 (98%)
Strand = Plus / Plus
Query: 6 aattccccagtgtcctgcatagcttctgtctattcctggagtgcaggttggaatgcacac 65
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 206 aattccccagtgtcctgcatagcttctgtctatccctggagtgcaggttggaatgcacac 265
Query: 66 cctgctctaacagaagtggtgagaataagtaaaatgtagggatagaatgaatgtgacatt 125
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 266 cctgctctaacagaagtggtgagaataagtaaattttagggatagaatgaatgtgacatt 325
Query: 126 gaaaagatttgtggaattttggagacatgagtagcacttaagtattagaagtggaagcag 185
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaaaagatttgtggaattttgaagacatgagtagcacttaagtattagaagtggaagcag 385
Query: 186 agaggtggcagaggagagtctcaggcaacaaaggaggtgctaagctagctgtgggagcat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agaggtggcagaggagagtctcaggcaacaaaggaggtgctaagctagctgtgggagcat 445
Query: 246 acaaaccctgaacctatgaactgggggtctgagctcagccagaacctctggggtgctcct 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 acaaaccctgaacctatgaactgggggtctgagctcagccagaacctctggggtgctcct 505
Query: 306 caga 309
||||
Sbjct: 506 caga 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_c18.g1 MSMg01no268_c18.g1 CHROMAT_FILE:
MSMg01no268_c18.g1 PHD_FILE: MSMg01no268_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:24 2005
(287 letters)
>mm_chr7_3330528_3331213
Length = 686
Score = 547 bits (283), Expect = e-160
Identities = 286/287 (99%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 taggtctcttaacccacctagccttctggcctctttcacgcaccccaacgagttctagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggtctcttaacccacctagccttctggcctctttcacgcaccccaacgagttctagac 260
Query: 61 gctgtttcccagcattgctggcattttaaactcaaagagtctctagagcctttctgtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgtttcccagcattgctggcattttaaactcaaagagtctctagagcctttctgtgtt 320
Query: 121 ctagattccgttgtgctgagccctgattttccccacccccaacatctggatactgttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagattccgttgtgctgagccctgattttccccacccccaacatctggatactgttcca 380
Query: 181 actcttcccagaaaccccacttggtagttttatgccttctctctccctagaccattctgg 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 actcttcccagaaaccccacttggtagttt-atgccttctctctccctagaccattctgg 439
Query: 241 ggaaaatagtctcatgagattgcctgctccagactaagactccagat 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggaaaatagtctcatgagattgcctgctccagactaagactccagat 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
