Query= MSMg01no270_a04.b1 MSMg01no270_a04.b1 CHROMAT_FILE:
MSMg01no270_a04.b1 PHD_FILE: MSMg01no270_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:34 2005
(691 letters)
>mm_chr7_119170265_119171355
Length = 1091
Score = 1303 bits (674), Expect = 0.0
Identities = 683/686 (99%)
Strand = Plus / Plus
Query: 4 ggaattccttgacagcagaggtggtgtttctcacttttgtttttctatatatattacaag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttgacagcagaggtggtgtttctcacttttgtttttctatatatattacaag 263
Query: 64 tctaggggagtgtttttgctggagcatagattagtaaatattcatttgtatggttgtaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctaggggagtgtttttgctggagcatagattagtaaatattcatttgtatggttgtaag 323
Query: 124 gatggaaggagactttgaattctaactggctattcctctgcttggagattttccatagca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatggaaggagactttgaattctaactggctattcctctgcttggagattttccatagca 383
Query: 184 taattggcaagctgtttccatatccatgacttatcttgataacagctttttcttcttaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taattggcaagctgtttccatatccatgacttatcttgataacagctttttcttcttaaa 443
Query: 244 ataacagacctctgttattttaaggttttgcattgagataaatctagatctttagtgtca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ataacagacctctgttattttaaggttttgcattgagataaatctagatctttagtgtca 503
Query: 304 tcttttgatagttgtcaatgatcaacatttctgttggagcgcttttcttatggctgaaga 363
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 504 tcttttgatagttgtcaatgatcaacatttctgttggagagcttttcttatggctgaaga 563
Query: 364 tagagaaagcagagctcactcaccctttctgttctggagtctgcattcctcagctcttca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tagagaaagcagagctcactcaccctttctgttctggagtctgcattcctcagctcttca 623
Query: 424 gctgcttggtgcttgttcatttggacatgttccagcattctagtactcctaaattatacc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gctgcttggtgcttgttcatttggacatgttccagcattctagtactcctaaattatacc 683
Query: 484 ccaaaaagagcaaaaggagagggcggtgttcattgaggagcgtatcactgttttactctg 543
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 684 ccaaaaagagcaaaaggagagggcggtgttcattgaggagcgcatcactgttttactctg 743
Query: 544 ctatgtgacttaattgcaatattgattttgatgttgagattgcttgcttttagtaccttc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctatgtgacttaattgcaatattgattttgatgttgagattgcttgcttttagtaccttc 803
Query: 604 agttttaattattgcctggtggttgtttctttgtttccttataagggtttgggtcataac 663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 804 agttttaattattgcctggtggttgtttctttgtttccttataagggtttgggtcatagc 863
Query: 664 atataggagtactctgccctgtagga 689
||||||||||||||||||||||||||
Sbjct: 864 atataggagtactctgccctgtagga 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_a04.g1 MSMg01no270_a04.g1 CHROMAT_FILE:
MSMg01no270_a04.g1 PHD_FILE: MSMg01no270_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:34 2005
(640 letters)
>mm_chr7_119332029_119333068
Length = 1040
Score = 1017 bits (526), Expect = 0.0
Identities = 591/628 (94%), Gaps = 27/628 (4%)
Strand = Plus / Minus
Query: 1 acttgtagcccgggctaggaagtaactatgggagatggaggatgtgggatgggtgaggcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 605 acttgtagcccgggctaggaagtaactatgggagatggaggatgtgggattggtgaggcc 546
Query: 61 agctgccccaggcctgctctcaagatagggtactcccgagggtaggagacagtcagctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agctgccccaggcctgctctcaagatagggtactcccgagggtaggagacagtcagctta 486
Query: 121 tttacagtgaacagccatagccgtgcagctagcttcaggggtgagtgaatgagatgaggg 180
|||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 485 tttacagtgaacagccgtagctgtgcagccagcttcaggggtgagtgaatgagatgaggg 426
Query: 181 gggtcaaatgcaggctgaccctggaagcatggccactcctggaaaaggtggacatagatg 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtgtcaaatgcaggctgaccctggaagcatggccactcctggaaaaggtggacatagatg 366
Query: 241 gtggctgcctggctcaaacacacgtactgtgagtcatgctacagccaacagcacacacat 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 365 gtggctgcctggctcaaacacacgtactgtgagtcatgctatagccaacagcacacacat 306
Query: 301 tctatctccccaccccggcagtcctctgggtaaggctcacggtcccagaggctcaaggat 360
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 305 tctatctccccaccccagcagtcctctgggtaaggctcacggtccctgaggctcaaggat 246
Query: 361 caagccttcaatggtacaatgatccccttagtcccctgagtcaagtctcctttctacagg 420
||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 245 caagccttcaatggtacaatgatccccttagtcccctgagtcaag---cc---------- 199
Query: 421 agcaaaagctctgttctcagtgctggcctccacctgacctctgacccctttcatggttgt 480
|||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 198 ----------ctgttctcagtgctggcctccatctgacctctgacccctttcatggttgt 149
Query: 481 aggacagagggcatccctgtgcctcagcttgtacccattcctgagtgtcactgtgaagtt 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aggacagagggcacccctgtgcctcagcttgtacccattcctgagtgtcactgtgaagtt 89
Query: 541 aggtcaaggggagttctaccaagcatgtccctatacattaaaacatccaccttgtgagta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 aggtcaaggggagttctaccaagcatgtccctatacattaaaacatccaccttgtgagta 29
Query: 601 gttctccc--g--aaagtatcattgaac 624
|||||||| | |||||||||||||||
Sbjct: 28 gttctccctagataaagtatcattgaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
