Query= MSMg01no270_e23.b1 MSMg01no270_e23.b1 CHROMAT_FILE:
MSMg01no270_e23.b1 PHD_FILE: MSMg01no270_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:56 2005
(325 letters)
>mm_chr7_82946600_82947322
Length = 723
Score = 563 bits (291), Expect = e-165
Identities = 312/319 (97%), Gaps = 3/319 (0%)
Strand = Plus / Minus
Query: 5 gaattctgcctctggagtactgggattagtggtgtgtgccact-ataacaggcttgctta 63
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 574 gaattctgcctctggagtactgggattagtggtgtgtgccactaataccaggcttgctta 515
Query: 64 tttttgagacagtagccaggctagcctcaaagccagttgacctttgtcaaagacaacccc 123
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 514 tttttgagacagtagccaggctagcctcatagccagttgacctttgtcaaagacaa-ccc 456
Query: 124 ccccatcctacctccccccacccaggaaagcctcaaggctaaaggctgaaaagacccagg 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 455 ccccatcctacctccccccacccaggaaagcctcaaggct-aaggctgaaaagacccagg 397
Query: 184 tgcgaggtgcgggccctaggtcaaaaagcttgcagagtctgacttggtgactcattcttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgcgaggtgcgggccctaggtcaaaaagcttgcagagtctgacttggtgactcattcttc 337
Query: 244 acacatgtttaagagtagcaaaacctagggaaggggtttccacgaaccacaaccaggcaa 303
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 336 atacatgtttaagagtagcaaaaccttgggaaggggtttccacgaaccacaaccaggcaa 277
Query: 304 agctacctagaaagaaatg 322
|||||||||||||||||||
Sbjct: 276 agctacctagaaagaaatg 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 723
Length adjustment: 9
Effective length of query: 316
Effective length of database: 714
Effective search space: 225624
Effective search space used: 225624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_e23.g1 MSMg01no270_e23.g1 CHROMAT_FILE:
MSMg01no270_e23.g1 PHD_FILE: MSMg01no270_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:56 2005
(324 letters)
>mm_chr7_82791321_82792044
Length = 724
Score = 603 bits (312), Expect = e-177
Identities = 321/324 (99%)
Strand = Plus / Plus
Query: 1 aataactttgtggagtaaaataaggcgagaatagatactgagacattaacatggaatgtt 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 201 aataactttgtggagtaaaataaggcgagaatagatactgagacattagcatgggatgtt 260
Query: 61 tgcagtcttaattactgtctcttttcaattacaagaaaacaggttagagtagccagtaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcagtcttaattactgtctcttttcaattacaagaaaacaggttagagtagccagtaat 320
Query: 121 tccccctgttgtcactcttcatatgtaatcaatgataggaggcaaaccaaagtcagactc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tccccctgttgtcactcttcatatgtaatcaatgataggaggcaaaccaaaggcagactc 380
Query: 181 ttcacaaacagtgtattgtcttgctctcctaaggctcccttgagttgacccattcctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcacaaacagtgtattgtcttgctctcctaaggctcccttgagttgacccattcctttt 440
Query: 241 attatatgagtatatacacagagatgtacatgcacacatgcaccaatatatatgattttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attatatgagtatatacacagagatgtacatgcacacatgcaccaatatatatgattttc 500
Query: 301 tatcatagacttgtattgcaagag 324
||||||||||||||||||||||||
Sbjct: 501 tatcatagacttgtattgcaagag 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
