Query= MSMg01no271_b16.b1 MSMg01no271_b16.b1 CHROMAT_FILE:
MSMg01no271_b16.b1 PHD_FILE: MSMg01no271_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:55 2005
(323 letters)
>mm_chr7_106158295_106159017
Length = 723
Score = 586 bits (303), Expect = e-172
Identities = 317/325 (97%), Gaps = 6/325 (1%)
Strand = Plus / Minus
Query: 5 gaattcataacaataggcaatctgtttgtgtcgggttggatttgccctggtgatgccagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaattcataacaataggcaatctgtttgtgtcgggttggatttgccctggtgatgccagc 407
Query: 65 tttgttttcactcaggacactgaggtgagactttggtgtagggtagggtaccccacaccg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tttgttttcactcaggacactgaggtgagactttggtgtagggtagggtaccccacaccg 347
Query: 125 ccagctgtactcttgactagatcttttcactaaactccagtgctccgctgagatttttct 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 346 ccagctgtactcttgactagatcatttcactaaactccagtgctccgctgagatttttct 287
Query: 185 ctcctttgactccatgttagaatattgcctttccatctcagcagatttctcagtggattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctcctttgactccatgttagaatattgcctttccatctcagcagatttctcagtggattt 227
Query: 245 caaatctctggtactttatctgatac------tttttgtttttgtttttgtttttgtttt 298
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 226 caaatctctggtactttatctggtactttttgtttttgtttttgtttttgtttttgtttt 167
Query: 299 tgttttcaagacagggtttctctgt 323
|||||||||||||||||||||||||
Sbjct: 166 tgttttcaagacagggtttctctgt 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_b16.g1 MSMg01no271_b16.g1 CHROMAT_FILE:
MSMg01no271_b16.g1 PHD_FILE: MSMg01no271_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:55 2005
(289 letters)
>mm_chr7_106012940_106013629
Length = 690
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1 atccctcgctgttgcagcgactagctgggttcctgtggggtttgcagaccgggccagact 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 atccctcgctgttgcagcgactagctgggttcctgtggggtttgcagagtgggccagact 260
Query: 61 tcttatcccgtctcttcactctgagcctgaccacggagagctgggagagcatgagactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttatcccgtctcttcactctgagcctgaccacggagagctgggagagcatgagactca 320
Query: 121 agaccaggcctcctgatgtgccgcctggctagcctgtgggagcagggggcggggg-tggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 agaccaggcctcctgatgtgccgcctggctagcctgtgggagcagggggcggggggtggg 380
Query: 180 ggaaggctgggcaccacatgctccagtaagggctcaccagtatgagcacacactcagtgg 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaagctgggcaccacatgctccagtaagggctcaccagtatgagcacacactcagtgg 440
Query: 240 aggggccagtaagtggccccaggaaactaggagaccctgcctgaatgc 287
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggggccagtaagtggccccaggaaactaggagaccctgcctgaatgc 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
