Query= MSMg01no276_c10.b1 MSMg01no276_c10.b1 CHROMAT_FILE:
MSMg01no276_c10.b1 PHD_FILE: MSMg01no276_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:01 2005
(353 letters)
>mm_chr7_114942759_114943511
Length = 753
Score = 659 bits (341), Expect = 0.0
Identities = 350/353 (99%)
Strand = Plus / Minus
Query: 1 aagtcaaaagcccacataaatgcacacatattgaagtgttgtcggagatgaaggctttct 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 553 aagtcaaaagcccacataaatgcacacatattgaagtgttgtcggggatgaaggctttct 494
Query: 61 tgttaagttatgtcttctctttacctgacaggcacctgtcttaacaccagtgtgtgaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgttaagttatgtcttctctttacctgacaggcacctgtcttaacaccagtgtgtgaatt 434
Query: 121 aaaactatcatcataccactgttcctgaacaatgtattttctgccctatagtaaatctaa 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 433 aaaactatcatcataccactgttcctgaacaatgtattttttgccctatagtaaatctaa 374
Query: 181 ttaaatttcttcatatctaactgtgtggcaggcatgcattaaagactcagtctcataggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttaaatttcttcatatctaactgtgtggcaggcatgcattaaagactcagtctcataggc 314
Query: 241 agagcagagagagagagagatagacacaattacaaactaggacagactacagcatcatcc 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 313 agagcagagagagagagagatagacacaattaaaaactaggacagactacagcatcatcc 254
Query: 301 ataagttaactaagcaactctgcatatgtgaatttgtaattccattgtgccta 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ataagttaactaagcaactctgcatatgtgaatttgtaattccattgtgccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_c10.g1 MSMg01no276_c10.g1 CHROMAT_FILE:
MSMg01no276_c10.g1 PHD_FILE: MSMg01no276_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:02 2005
(303 letters)
>mm_chr7_114830507_114831207
Length = 701
Score = 567 bits (293), Expect = e-166
Identities = 300/303 (99%), Gaps = 2/303 (0%)
Strand = Plus / Plus
Query: 1 ttgttattaactttctgtccttcactcccgattaataaattacactattctgtctcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgttattaactttctgtccttcactcccgattaataaattacactattctgtctcagtt 260
Query: 61 tgattttgtttagattctatactatttttcatacttagatttttttttttctgagaaact 120
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tgattttgtttagattctatactatttttcatacttagattttttttt--ctgagaaact 318
Query: 121 atgattagcaacaagaggtcttttatggaattaaaaaccaaatcttgtcttttaaatatc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 319 atgattagcaacaagaggtcttttatggaattaaaaaccaaattttgtcttttaaatatc 378
Query: 181 tggaaaagaaaatagtctgattgggaaacaatcttgcatgaaacacatggggatcgagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tggaaaagaaaatagtctgattgggaaacaatcttgcatgaaacacatggggatcgagtt 438
Query: 241 ttcaggacttcctgaggtgtgtgggggagggtaaggcagatgatagactattgtaaacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttcaggacttcctgaggtgtgtgggggagggtaaggcagatgatagactattgtaaacag 498
Query: 301 ttc 303
|||
Sbjct: 499 ttc 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 701
Length adjustment: 9
Effective length of query: 294
Effective length of database: 692
Effective search space: 203448
Effective search space used: 203448
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
