Query= MSMg01no277_d08.b1 MSMg01no277_d08.b1 CHROMAT_FILE:
MSMg01no277_d08.b1 PHD_FILE: MSMg01no277_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:18 2005
(316 letters)
>mm_chr7_104685172_104685894
Length = 723
Score = 545 bits (282), Expect = e-159
Identities = 307/318 (96%), Gaps = 7/318 (2%)
Strand = Plus / Plus
Query: 5 gaattcactctaaaacatctctactgccttccaggcaaacacttgcctgcatggggtgta 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaatttactctaaaacatctctactgccttccaggcaaacacttgcctgcatggggtgta 264
Query: 65 atggggatgctccctgccctgtcatgagacatctgtagcactttcaaagtccagcttcct 124
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atggggatgctttctgccctgtcatgagacatctgtagcactttcaaagtccagcttcct 324
Query: 125 tactcggaacagcagacagaggtgaaaacctgcaactgtcagcgtgccttagagacttca 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tactcggaacatcagacagaggtgaaaacctgcaactgtcagcgtgccttagagacttca 384
Query: 185 tggaggctttattctcccttaaaattatggattttctttg--ttttttttttgtgtgtgt 242
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 tggaggctttattctcccttaaaattatggattttctttggtttttttttttgtgtgtgt 444
Query: 243 ----ttttgcatttttt-aaagtttgttttagcttttaatgggttcagacagaggctttc 297
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgtttttgcatttttttaaagtttgttttagcttttaatgggttcagacagaggctttc 504
Query: 298 tctattgccctgacttcc 315
||||||||||||||||||
Sbjct: 505 tctattgccctgacttcc 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 723
Length adjustment: 9
Effective length of query: 307
Effective length of database: 714
Effective search space: 219198
Effective search space used: 219198
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_d08.g1 MSMg01no277_d08.g1 CHROMAT_FILE:
MSMg01no277_d08.g1 PHD_FILE: MSMg01no277_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:18 2005
(403 letters)
>mm_chr7_104843630_104844432
Length = 803
Score = 748 bits (387), Expect = 0.0
Identities = 399/403 (99%)
Strand = Plus / Minus
Query: 1 agtcagttgacctctagactccactttttttggctgtagaattgtactatctatggggct 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 603 agtcagttgacctctagactccactttttttggctgtagaattgtaatatctatggggct 544
Query: 61 aaggctgtttaggttggataacatacatggaggatgtgatagcagttttatctttctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aaggctgtttaggttggataacatacatggaggatgtgatagcagttttatctttctttc 484
Query: 121 tcttcttcctcctttttttcctttggattcttttcaacagaggaatctaaagattttttt 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcttcttcctccttttttccctttggattcttttcaacagaggaatctaaagattttttt 424
Query: 181 cctcacatatatgtatatacctacctacatacagtcagatgtgagccaccctgcctgggc 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 423 cctcacatatatgtatatacctacctacatacagtcaggtgtgagccaccctgcctgggc 364
Query: 241 gcagtgaccctatctgcaaaggcattaggcagtctcacaagctgatccatgtctccagtc 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 363 gcagtgaccctatctgcaaaggcattaggcagtctcacaagctgacccatgtctccagtc 304
Query: 301 agttccaagtgttacgttttaaaatttagtttgttgttagtgagactaggaggcaggtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agttccaagtgttacgttttaaaatttagtttgttgttagtgagactaggaggcaggtcc 244
Query: 361 cctgaacaggaatgagaaggtgggagtggagtaagggagggga 403
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cctgaacaggaatgagaaggtgggagtggagtaagggagggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
