Query= MSMg01no278_g01.b1 MSMg01no278_g01.b1 CHROMAT_FILE:
MSMg01no278_g01.b1 PHD_FILE: MSMg01no278_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:41 2005
(554 letters)
>mm_chr7_59725255_59726208
Length = 954
Score = 1035 bits (535), Expect = 0.0
Identities = 549/554 (99%)
Strand = Plus / Plus
Query: 1 tccacctgggccaagtcatgtttattcatttgtatgagtttacttctgattcacatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tccacctgggccaagtcatgtttattcatttgtatgagtttacttctgatttacatattt 260
Query: 61 tactccatatccctgtttgtttctctgtttgttagtactatgttttattatcattcatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactccatatccctgtttgtttctctgtttgttagtactatgttttattatcattcatac 320
Query: 121 atagaataaaaattgagttaattgattattcacacttttactcttaatttaatatatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagaataaaaattgagttaattgattattcacacttttactcttaatttaatatatgct 380
Query: 181 agctatctgtgtcttctctgttaatataaattctatgtagaaagtacataaaattctata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctatctgtgtcttctctgttaatataaattctatgtagaaagtacataaaattctata 440
Query: 241 gtctatattattctacataaacacatcttgttatgtatttttatgaaatcagtttgtata 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gtctatataattctacataaacacatcttgttatgtatttttatgaaatcagcttgtata 500
Query: 301 tgctcaggaagaaacaaaagcaccacagtgttgttttaacactatgaaatgatgaacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctcaggaagaaacaaaagcaccacagtgttgttttaacactatgaaatgatgaacact 560
Query: 361 tcggtatattaagcttgttttctcattatgatctggaagttgtgagcatacctccataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcggtatattaagcttgttttctcattatgatctggaagttgtgagcatacctccataca 620
Query: 421 taggctctgttagagttaccatccagtagttactttttttaacctattanaatggcactt 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 taggctctgttagagttaccatccagtagttactttttttaacctattaaaatggcactt 680
Query: 481 gtgtgtgggactagaaagtcatgttacccgggaacgcagtctgaaggaggactgaggttg 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 681 gtgtgtgggactagaaagtcatgttacccgggaaagcagtctgaaggaggactgaggttg 740
Query: 541 aggcatgtctaaac 554
||||||||||||||
Sbjct: 741 aggcatgtctaaac 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_g01.g1 MSMg01no278_g01.g1 CHROMAT_FILE:
MSMg01no278_g01.g1 PHD_FILE: MSMg01no278_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:41 2005
(286 letters)
>mm_chr7_59876829_59877514
Length = 686
Score = 468 bits (242), Expect = e-136
Identities = 275/286 (96%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 caccaaagcttctttaaaagctaagtcatccctcaggagacagctgacacaccatcactt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 370 caccaaagcttctttaaaagctaagtcatccctcaggagacagctgaaacaccatcactt 311
Query: 61 agtgaactttctacaaatgttatcttcctctcattttcaccttctcagtgactcatctgg 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agtgaactttctacaaatgtcatcttcctctcattttcaccttctcagtgactcatctgg 251
Query: 121 tatctaacatgatctatattctcatggaagctactctgtttttttgactgattttattac 180
||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 250 tatctaaaatgatctatattctcatggaaattactcggtttttttgactgattttattac 191
Query: 181 atattaatattttgttttattatattctgaggttaaggagtaattcaaatttgtttacaa 240
|||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 190 atattagttttttgttttattatattctgaggttaagaagtaattcaaatttgtttacaa 131
Query: 241 aatacaaccccctgcatatttgttacttttatgatacaaacaatta 286
||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 130 aatacaa-cccctgcatatttgttacttttaggatacaaacaatta 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
