Query= MSMg01no279_h08.b1 MSMg01no279_h08.b1 CHROMAT_FILE:
MSMg01no279_h08.b1 PHD_FILE: MSMg01no279_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:03 2005
(332 letters)
>mm_chr7_100967940_100968671
Length = 732
Score = 632 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Minus
Query: 5 gaattcttgtaatatgaacatgttctaatgagttctaaaatatgaatgaaaagatttctc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gaattcttgtaatatgaacatgttctaatgagttctaaaatatgaatgaaaagatttctc 289
Query: 65 ttagaaacaccctctaatttcatcataagtaacatttattaacttaaattaacaaaattg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttagaaacaccctctaatttcatcataagtaacatttattaacttaaattaacaaaattg 229
Query: 125 tcccataactctcaaattttgttttcttggtcttttgataccaagtagcaatctattgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tcccataactctcaaattttgttttcttggtcttttgataccaagtagcaatctattgtc 169
Query: 185 caggctatgcttgaaccaactatgtaactcagagtagccttgaaccttaagcaatcttct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 caggctatgcttgaaccaactatgtaactcagagtagccttgaaccttaagcaatcttct 109
Query: 245 gtctccgtctatcaagcactgggattaaagatgtgagctggcatgtctagctatcatttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gtctccgtctatcaagcactgggattaaagatgtgagctggcatgtctagctatcatttt 49
Query: 305 tgctttaaattgtttatttttcatata 331
|||||||||||||||||||||||||||
Sbjct: 48 tgctttaaattgtttatttttcatata 22
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_h08.g1 MSMg01no279_h08.g1 CHROMAT_FILE:
MSMg01no279_h08.g1 PHD_FILE: MSMg01no279_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:03 2005
(292 letters)
>mm_chr7_100881123_100881813
Length = 691
Score = 487 bits (252), Expect = e-142
Identities = 282/292 (96%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 1 tctattgatttcctgaaaataaatagaaaagggaaagagctaagtaagcttcgtaacaga 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctattgaattcctgaaaataaatagaaaagggaaagagctaagtaagcttcgtaacaga 260
Query: 61 ataactgtgcaatggaggaggcaggctgtcactggcgtttccacaatagaaagtagataa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataactgtgcaatagaggaggcaggctgtcactggcgtttccacaatagaaagtagataa 320
Query: 121 tgagaagaactccatgtctattaaagtagatgaataaaatctactaactttgaaagagaa 180
|||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 tgaggagaactccatctctattaaagtagatgaataaaatctactgactttgaaagagaa 380
Query: 181 aagttagacagaggtcatcctcaggaaatgtggctatatatttaagaaagatgggaaatt 240
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 aagttagacagaggttatcctcaggaaatgtggctatatatttaagaaa-atgggaaatt 439
Query: 241 tcccgaacctcaagaaatcagaatttttcctttccagttcattcatcaccta 292
|||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 440 ccccgaacctcaagaaagcagaatttttcctttccagttcattcatcgccta 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
