TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTTTGTAGACTAGGTTAGCCTCTAACTCCTTGCTCCTGCCTCCC
AAGTGTTGGGATTGAAGGCATGTGCCACCACTGCCCAGTGACTGTGGATC
CTTGACTCTGAATTTTAACTTTGGGTTTTCTGTTTGTTTTCCATTTTTGT
TTTTGTTTTGTTTTCAAGACAACGGTTTCTCAGTGTAGCCCTGGCTGTCC
TGGAACTCACTCTGTATACCTGGCTGGTCTCGAACTCACAGAGAGCCACC
TGCGTCTGCCTCCTAAGTACTTGGGTTACAGGAGTTTGCCATCACTGCCC
AGCTTTGTTATCATCTCTATTTTCCTTCTCCCACTTACTGATCTCCTTCT
TCCTAGCTAATTAATTCCCTTTCTATTTTCCTATTTATTTTTTTAACTTG
ACGTGGTAATGCACACCTTCAATCCCATCATTTAGGGGGCAGAAGCTTTC
TATTTTCATGTTGATTTTTTTTTTTTATTACATGGGTGCACATATGTAGA
AGTCATAGGACAACTCCCAGCACCCAGTTCTCTGCTTAAGTTACTTGGGA
GCTAGGACTCTATCTGAGGTTATCAAGTTTGGCGGCAATCTCTTTTCACT
GGTGAGCCATCCTGTCAGTCCATGGTTTTTGTTTTGTTGAATTTATCTAT
CTACCTACCTGTTTATTC

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAAGTCATTCTTGACTACACATGGGCACG
TGGGTTTAAGACCTGCCTGGGCTACATGAGTTCTTATCTCAAGAACAAAA
TAAGAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCCCTTCC
AGAGGTCTTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATT
TGTAATGAGATCTGATGCCCTTTTATGGAGTGTCTGAATACAGCTACAAT
GTGCTTACATATAATAAATAAATAAATCTTTAAAAAAAAAACAAAACAAG
GTCCAGTGAGGTGGTTTTTTATTAAACACCCCCTCCTCTTTGTTTTTGTT
ATTGTTTTTTTTTTTCAAGACAGGGTTTTCTGTAGACCTGAATGTCCTGG
GACTCACTCTGTAGACCAGATTGGCCTTGGACTCAGAAATCTGCCTGCCT
CTGCCTCCCAAGTGCTGGGATTAAAGGCCCGCGCCACCACGCCCGGCAGG
AAAATATTCTTGGTGCCAAGCTTCTTGACAACTTCAAGCCCCAACGATGC
ACATAGGTGAAAGAAGAGAACTGGCTCTCACACGTTGTCCACCTCTGACC
TCCACAGGCATGCAGTAGCTTGTGCACTTCCCCTGGGATAGACAGGTAGA
TAGATAGATAGTTAGCTTTTAA

Query= MSMg01no289_d22.b1 MSMg01no289_d22.b1 CHROMAT_FILE:
MSMg01no289_d22.b1 PHD_FILE: MSMg01no289_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:31 2005
         (671 letters)



>mm_chr7_3356237_3357306
          Length = 1070

 Score = 1207 bits (624), Expect = 0.0
 Identities = 657/668 (98%), Gaps = 1/668 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcactttgtagactaggttagcctctaactccttgctcctgcctcccaagtgttg 63
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactttgtagactaggctagcctctaactccttgctcctgcctcccaagtgttg 263

                                                                       
Query: 64  ggattgaaggcatgtgccaccactgcccagtgactgtggatccttgactctgaattttaa 123
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggattaaaggcatgtgccaccactgcccagtgactgtggatccttgactctgaattttaa 323

                                                                       
Query: 124 ctttgggttttctgtttgttttccatttttgtttttgttttgttttcaagacaacggttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctttgggttttctgtttgttttccatttttgtttttgttttgttttcaagacaacggttt 383

                                                                       
Query: 184 ctcagtgtagccctggctgtcctggaactcactctgtatacctggctggtctcgaactca 243
           ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 ctcagtgtagccctgactgtcctggaactcactctgtacacctggctggtctcgaactca 443

                                                                       
Query: 244 cagagagccacctgcgtctgcctcctaagtacttgggttacaggagtttgccatcactgc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 444 cagagagccacctgcgtctgcctcctaagtacttgggttacaggagtttgctatcactgc 503

                                                                       
Query: 304 ccagctttgttatcatctctattttccttctcccacttactgatctccttcttcctagct 363
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccagctttgttatcatctctagtttccttctcccacttactgatctccttcttcctagct 563

                                                                       
Query: 364 aattaattccctttctattttcctatttatttttttaacttgacgtggtaatgcacacct 423
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 564 aattaattccctttctattttcctatttatttttttaacttgacgtggtaatgcacactt 623

                                                                       
Query: 424 tcaatcccatcatttagggggcagaagctttctattttcatgttgattttttttttttat 483
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 624 taaatcccatcatttagggggcagaagctttctattttcatgttgattttttttttt-at 682

                                                                       
Query: 484 tacatgggtgcacatatgtagaagtcataggacaactcccagcacccagttctctgctta 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 683 tacatgggtgcacatatgtagaagtcataggacaactcccagcacccagttctctccttc 742

                                                                       
Query: 544 agttacttgggagctaggactctatctgaggttatcaagtttggcggcaatctcttttca 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agttacttgggagctaggactctatctgaggttatcaagtttggcggcaatctcttttca 802

                                                                       
Query: 604 ctggtgagccatcctgtcagtccatggtttttgttttgttgaatttatctatctacctac 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ctggtgagccatcctgtcagtccatggtttttgttttgttgaatttatctatctacctac 862

                   
Query: 664 ctgtttat 671
           ||||||||
Sbjct: 863 ctgtttat 870


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1070
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1060
Effective search space:   700660
Effective search space used:   700660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)