ATCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGCGAAAATCCGCGG
AATTCCACAGGGTTTACGGTGATTTATAATGGAAACCTTGGTGCGGCTGG
GCATTGTTCTCCCTGACTTAGTGCCCAAAGAGACCACTAAATCCCAGCCC
ATCAGAAGCAGTGATGGAGCCTGCCGTGTCCGGCAGTCCCGATGCCCTCC
ACCACAACAAAGTGGCCTTTTGTGATTTATTACATTTTTCTCCAAAAACC
TTCAGCCATGCACAAGGCCAGCCTAGATCCCCAAGTGGGCTGTCCCTCAC
TGTCCCGCTGAGGGAGACGCCAAGTGTCAGTCTGAATAACGCGCCTTCAA
TACTTCCCAGGAGCCGGTCTGGCTCCAGGGGATAAAGCCGCCCCCACACT
TTCTCAGGCTCTTCAGGCCTGGATGAAAGCTGCCCCAAGCAGGCCGGCGA
CAAGTGGCCACCACGCCACCTGGCCTTCAGCAAGAATGGACTGTCTGGGC
TGATTTGGTGACTAGCCCCTGCTGGCGAGGGCAGGAGGGCTCTGACAGGG
TGAGAGGTTGCTGGAGAGAGGGAACCTTCCAGTGCCGCGAAGCTGATGAG
AAAATCCAGGGACTCCCAGGCATCCTTCAAGGTGCCAGTGGGAACTGGTA
GCCCAGTGTCCATGACTAAAAAGCATAACTATCAGCCACATATCAAGCAT
AGAGTAATTCGCTTTTATTGATTGAT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTCGGAGGTTCCCTGGCAGACTC
AGGCTGCCAAGTAACTGTGATCATCCCCATGAAGCATACCCTCAGAGTCC
ACTGTCACACCAGGACACAAGCAGGACCACACTGAAGAAATTGTCCACTG
GAGACCAAAGGTGTCCTCATGAGGTCAGTGAGGAGTATGAAGCTAAGGGA
GAGGCAAGAGCCTAGGAGGAGCAGAGGACACTTAACATCAGAGCCTGTGG
CCTGGTGGGAGATTTTTCACCCTATCTACTCACATTGAGGACACCAAGGT
GGCTGCTGGCAGTTTATGGTATGTGCCCACCCCCGCTCCTCCTCTCCTGG
CCCAATCTGCTGGGTCCATGGCCCTCTTGAAAAAGAGTACAGTAGGCACA
GGACCCCTGAGAGATAGGCCTGGAGAGAAAGGCTGAGACCCTATGTGAGT
TAGAACTTTGTCCCAGGCACTATGCCCGAACCCAACTGTAGAGCATAGCC
AGAGAAAGGGCTTGGCAGACCCCTGCTCCTATGACAATGACCTATTCCGA
GTGGCTGTGGCCTCTGAGGTGATGCCAAGAAGCCTGAGACCCTCCCCTGG
TAGGCTGGCTCTAGGTTTAGAACACAGTATGTGTCACCAGGCAGACAGAC
ATGGAGCCCAGCGGTCCTCGCACATAATCCCAGA

Query= MSMg01no290_j19.b1 MSMg01no290_j19.b1 CHROMAT_FILE:
MSMg01no290_j19.b1 PHD_FILE: MSMg01no290_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:13 2005
         (548 letters)



>mm_chr7_152201106_152202053
          Length = 948

 Score = 1013 bits (524), Expect = 0.0
 Identities = 542/548 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttataatggaaaccttggtgcggctgggcattgttctccctgacttagtgcccaaagag 60
           |||||||||||||||||||||||||||||||||||||||||||||  ||||   ||||||
Sbjct: 748 tttataatggaaaccttggtgcggctgggcattgttctccctgacagagtgaagaaagag 689

                                                                       
Query: 61  accactaaatcccagcccatcagaagcagtgatggagcctgccgtgtccggcagtcccga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 accactaaatcccagcccatcagaagcagtgatggagcctgccgtgtccggcagtcccga 629

                                                                       
Query: 121 tgccctccaccacaacaaagtggccttttgtgatttattacatttttctccaaaaacctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tgccctccaccacaacaaagtggccttttgtgatttattacatttttctccaaaaacctt 569

                                                                       
Query: 181 cagccatgcacaaggccagcctagatccccaagtgggctgtccctcactgtcccgctgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cagccatgcacaaggccagcctagatccccaagtgggctgtccctcactgtcccgctgag 509

                                                                       
Query: 241 ggagacgccaagtgtcagtctgaataacgcgccttcaatacttcccaggagccggtctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 508 ggagacgccaagtgtcagtctgaataacgcgccttcaatacttcccaggagccggcctgg 449

                                                                       
Query: 301 ctccaggggataaagccgcccccacactttctcaggctcttcaggcctggatgaaagctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctccaggggataaagccgcccccacactttctcaggctcttcaggcctggatgaaagctg 389

                                                                       
Query: 361 ccccaagcaggccggcgacaagtggccaccacgccacctggccttcagcaagaatggact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ccccaagcaggccggcgacaagtggccaccacgccacctggccttcagcaagaatggact 329

                                                                       
Query: 421 gtctgggctgatttggtgactagcccctgctggcgagggcaggagggctctgacagggtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtctgggctgatttggtgactagcccctgctggcgagggcaggagggctctgacagggtg 269

                                                                       
Query: 481 agaggttgctggagagagggaaccttccagtgccgcgaagctgatgagaaaatccaggga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agaggttgctggagagagggaaccttccagtgccgcgaagctgatgagaaaatccaggga 209

                   
Query: 541 ctcccagg 548
           ||||||||
Sbjct: 208 ctcccagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no290_j19.g1 MSMg01no290_j19.g1 CHROMAT_FILE:
MSMg01no290_j19.g1 PHD_FILE: MSMg01no290_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:13 2005
         (288 letters)



>mm_chr7_151987895_151988582
          Length = 688

 Score =  530 bits (274), Expect = e-155
 Identities = 283/286 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctcggaggttccctggcagactcaggctgccaagtaactgtgatcatccccatgaagca 60
           |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 201 tctcggaggttccctggcagactcaggctgccaagtaactgtgaccatctccatgaagca 260

                                                                       
Query: 61  taccctcagagtccactgtcacaccaggacacaagcaggaccacactgaagaaattgtcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taccctcagagtccactgtcacaccaggacacaagcaggaccacactgaagaaattgtcc 320

                                                                       
Query: 121 actggagaccaaaggtgtcctcatgaggtcagtgaggagtatgaagctaagggagaggca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggagaccaaaggtgtcctcatgaggtcagtgaggagtatgaagctaagggagaggca 380

                                                                       
Query: 181 agagcctaggaggagcagaggacacttaacatcagagcctgtggcctggtgggagatttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagcctaggaggagcagaggacacttaacatcagagcctgtggcctggtgggagatttt 440

                                                         
Query: 241 tcaccctatctactcacattgaggacaccaaggtggctgctggcag 286
           |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaccctagctactcacattgaggacaccaaggtggctgctggcag 486


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space:   189441
Effective search space used:   189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)