Query= MSMg01no293_g04.b1 MSMg01no293_g04.b1 CHROMAT_FILE:
MSMg01no293_g04.b1 PHD_FILE: MSMg01no293_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:46 2005
(316 letters)
>mm_chr7_122810566_122811280
Length = 715
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtggatcaaattcagtaaatctgaagtcactggaataaaggcccctcaggggg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattcagtggatcaaattcagtaaatctgaagtcactggaataaaggcccctcaggggg 456
Query: 65 ggaaaaaaaaacgtgtcaattttaaaggtctttcctaactgaagaccattttgtgataga 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gg-aaaaaaaacgtgtcaattttaaaggtctttcctaactgaagaccattttgtgataga 397
Query: 125 gccaaaggttaataaaatcagtagtgaatgtagcaattttacagataagctattcacaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gccaaaggttaataaaatcagtagtgaatgtagcaattttacagataagctattcacaac 337
Query: 185 aagtgtagttacttgaataaaaagctaattcagttctaaaatgccacatgcagtagcagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aagtgtagttacttgaataaaaagctaattcagttctaaaatgccacatgcagtagcagt 277
Query: 245 gaatagctgcttttaggtgctttccagaggaggttaaagtacagaatcgcagcactcttc 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 276 gaatagctgcttttaggtgctttccagaggagggtaaagtacagaatcgcagcactcttc 217
Query: 305 tctcgccgcgtc 316
||||||||||||
Sbjct: 216 tctcgccgcgtc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_g04.g1 MSMg01no293_g04.g1 CHROMAT_FILE:
MSMg01no293_g04.g1 PHD_FILE: MSMg01no293_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:46 2005
(241 letters)
>mm_chr7_122625912_122626552
Length = 641
Score = 464 bits (240), Expect = e-135
Identities = 240/240 (100%)
Strand = Plus / Plus
Query: 2 aggtaggttgcatggctctgtggctgatgctataggagggggtggaaatacaagccatct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aggtaggttgcatggctctgtggctgatgctataggagggggtggaaatacaagccatct 261
Query: 62 tctcaaattatctactgagatttctaagctggttccttaccagccagtgcaggaaacagt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tctcaaattatctactgagatttctaagctggttccttaccagccagtgcaggaaacagt 321
Query: 122 atgtccaatatttatcggtgtcttacaggcttcttttgacccctttagatttaaaatgaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgtccaatatttatcggtgtcttacaggcttcttttgacccctttagatttaaaatgaa 381
Query: 182 aatggtagatttctagatcacttggggcacaattatctgggaaacaatgcttctgaggta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aatggtagatttctagatcacttggggcacaattatctgggaaacaatgcttctgaggta 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
