Query= MSMg01no293_l21.b1 MSMg01no293_l21.b1 CHROMAT_FILE:
MSMg01no293_l21.b1 PHD_FILE: MSMg01no293_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:15 2005
(253 letters)
>mm_chr7_86171617_86172272
Length = 656
Score = 433 bits (224), Expect = e-126
Identities = 247/256 (96%), Gaps = 3/256 (1%)
Strand = Plus / Minus
Query: 1 atatgggaaagaggaaatcgttactaagaatttcatccatagcattgaggacccaggg-- 58
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 456 atatgggaaagaggaaatcattactaagaatttcatccatagcattgaggaaagagggaa 397
Query: 59 -aaaaaacttgtattttacaagttcatggggtgcaagttcaggggacaaagtgactcaaa 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 396 aaaaaaacttgtattttacaagtccatggggtgcaagttcaggggacaaagtgactcaaa 337
Query: 118 acaaacactcaagtcagacatgacagaaaagtctcagaacactaaacactagagtaaatt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acaaacactcaagtcagacatgacagaaaagtctcagaacactaaacactagagtaaatt 277
Query: 178 ctgaatttacaaaaagaaaaggcaggtcatgtccacacaagggctgcattaaaatcagat 237
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 276 ctgaatttacaaaaagaaaaggcaggtcatgtccgcacaagggctgcattaaaatcagat 217
Query: 238 tgtagccgcaggaagc 253
||||||||||||||||
Sbjct: 216 tgtagccgcaggaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 656
Length adjustment: 9
Effective length of query: 244
Effective length of database: 647
Effective search space: 157868
Effective search space used: 157868
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no293_l21.g1 MSMg01no293_l21.g1 CHROMAT_FILE:
MSMg01no293_l21.g1 PHD_FILE: MSMg01no293_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:15 2005
(291 letters)
>mm_chr7_85995126_85995816
Length = 691
Score = 524 bits (271), Expect = e-153
Identities = 286/291 (98%)
Strand = Plus / Plus
Query: 1 cttaacctatctgcatcttgaccttccctcctagacgatgaggctaatgacccagatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 cttaacctatctgcatcttgaccttccctcctagacgatgaggctaatgacacagatcat 260
Query: 61 ggggttgagggcagggagtaaaattcattatattcataatagtgttataattaggatgtg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggttgagggcagggagtaaaattcattatattcataatagtgttataattaggatgtg 320
Query: 121 aaattcttagcactcagtctgaaagagctggttatgcagcaaaagccaatctcatgtgtt 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaattcttagcactcagtctaaaagagctggttatgcagcaaaagccaatctcatgtgtt 380
Query: 181 gcgcccaccttgtccggcaaggaaaaacgcaaaacggtcggattcttctcaacagcttta 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 gcgcccaccttgtccggcaaggaaaaacgcaacacggtcggattcttctcaacagcttta 440
Query: 241 ttgcaggaacatctcgatgctacgggaaccccggaaacccagggaggactg 291
||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgcaggaacacctcgatgctacgggaaccccggaaacccagggaggactg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
