Query= MSMg01no297_d20.b1 MSMg01no297_d20.b1 CHROMAT_FILE:
MSMg01no297_d20.b1 PHD_FILE: MSMg01no297_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:38 2005
(663 letters)
>mm_chr7_118487348_118488408
Length = 1061
Score = 1135 bits (587), Expect = 0.0
Identities = 602/607 (99%), Gaps = 2/607 (0%)
Strand = Plus / Minus
Query: 1 cccttgagtccatcctgtgaggtagatgtcagcacttctactgtggagacacaagaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cccttgagtccatcctgtgaggtagatgtcagcacttctactgtggagacacaagaaggt 546
Query: 61 taaaacttactaaatggcacatgacaatttaatggaatagaaaaatgaaggattcaggac 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 545 taaaacttactaaatggcacatgacaatttaatggaatggaaaaatgaaggattcaggac 486
Query: 121 tgacagacattgaggccctcacgtctggttattgtagagaagagacgtgcttgttttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgacagacattgaggccctcacgtctggttattgtagagaagagacgtgcttgttttgtg 426
Query: 181 tatttctactgatactctgtagatagatgttccattatcaataaatatatgaggtcagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tatttctactgatactctgtagatagatgttccattatcaataaatatatgaggtcagtt 366
Query: 241 ataaggagactaatatcttctaaaccaaacttcttcccctgggtggagaactgttccgtg 300
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ataaggagactaata-c-actaaaccaaacttcttcccctgggtggagaactgttccgtg 308
Query: 301 gcgattgagacgctctatggtgtctataacacactcatggggtcaaatcctcctggaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gcgattgagacgctctatggtgtctataacacactcatggggtcaaatcctcctggaaca 248
Query: 361 aagtcacctaatgagtaagttttcaataaaatagctgaatctgatgctactaggggccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aagtcacctaatgagtaagttttcaataaaatagctgaatctgatgctactaggggccaa 188
Query: 421 ggcccacttctaagtacttaatttgttataaatccacttaactagccctatgaggaagac 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ggcccacttctaagaacttaatttgttataaatccacttaactagccctatgaggaagac 128
Query: 481 agcgttataatcatctagttgagatatggagaaactgaggcacaataaggagcagagtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 agcgttataatcatctagttgagatatggagaaactgaggcacaataaggagcagagtct 68
Query: 541 gacagtctgtttccccaatgtccccagaagaatccttccgggactatcagttacaatgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gacagtctgtttccccaatgtccccagaagaatccttccgggactatcagttacaatgct 8
Query: 601 agagttc 607
|||||||
Sbjct: 7 agagttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1061
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1051
Effective search space: 686303
Effective search space used: 686303
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_d20.g1 MSMg01no297_d20.g1 CHROMAT_FILE:
MSMg01no297_d20.g1 PHD_FILE: MSMg01no297_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:38 2005
(556 letters)
>mm_chr7_118310839_118311793
Length = 955
Score = 1007 bits (521), Expect = 0.0
Identities = 545/553 (98%), Gaps = 1/553 (0%)
Strand = Plus / Plus
Query: 1 tctggagctggagttataaaggcagttgtgagctgttcgatgtgggtgctgggaactgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggagctggagttataaaggcagttgtgagctgttcgatgtgggtgctgggaactgaa 260
Query: 61 ctcaggacctctgcaagagtggtcagcgctcttaaccactgggccacccacctctctagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaggacctctgcaagagtggtcagcgctcttaaccactgggccacccacctctctagt 320
Query: 121 cccactttttacttttaaaaattcatcttaaattttttgatataataaataatcctgtga 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccactttttacttttcaaaattcatcttaaattttttgatataataaataatcctgtga 380
Query: 181 caaatatttcagcttccatgtatctctgtggttttagtttttttcttgggatagatcccc 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaatatttcagcttccat-tatctctgtggttttagtttttttcttgggatagatcccc 439
Query: 241 agttgtggttttattgaagctttttctttttcacagtatgtttttcagagagattaaaga 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 agttgtggttttattgaagctttttctttttcacagtctgtttttcagagagattaaaga 499
Query: 301 gatgttagaatccctagacgtatgttaccatcattttactagagccccactgctctgaat 360
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 500 gatgttagaatccctagacgtatgttaccatcattttactagagttccactgctctgaat 559
Query: 361 aaggcagcaacatcataaactacacctctgccaatcacacagatgggatttttatctttt 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 560 aaggcagcaacatcataaactacacctctgccaatcacgcagatgggatttttatctttt 619
Query: 421 ttgttttagtttgcatacatttgtttacaaagattttcctgggcttgtttttgaactagc 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 620 ttgttttagtttgcatacatttgtttacaaagattttcgtgggcttgtttttgaactagc 679
Query: 481 tataattctttgatgaaatattgatgaatgcctttcactctgggaagatcaaaatacttt 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 680 tataattctttgatgaaatattgatgaatgcctttcactctggggagatcaaaatacttt 739
Query: 541 taaaattatttta 553
|||||||||||||
Sbjct: 740 taaaattatttta 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 955
Length adjustment: 10
Effective length of query: 546
Effective length of database: 945
Effective search space: 515970
Effective search space used: 515970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
