Query= MSMg01no297_g10.b1 MSMg01no297_g10.b1 CHROMAT_FILE:
MSMg01no297_g10.b1 PHD_FILE: MSMg01no297_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:50 2005
(686 letters)
>mm_chr7_97181038_97182123
Length = 1086
Score = 1212 bits (627), Expect = 0.0
Identities = 669/683 (97%)
Strand = Plus / Plus
Query: 4 ggaattccataatatcagagtattcaagatgtggcatggttattattggatgcttttagc 63
|||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 204 ggaattccataagagaagagtattcaagatgtggcacggttattattggatgcttttagc 263
Query: 64 caggtttacagcaagactcaagagcaaaacgtatagaaaagtttgaaagaaatgtgtttt 123
||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 264 cagatttacagcaagactcgggagcaaaacatatagaaaagtttgaaagaaatgtgtttt 323
Query: 124 cactggaaaaggaagcagttgaaataaaggtgtggtattacagaggttagtgcctttaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cactggaaaaggaagcagttgaaataaaggtgtggtattacagaggttagtgcctttaaa 383
Query: 184 gataccaagaaaaagaagaggaatagaaggaaaataccactttgcatgagaaaatagaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gataccaagaaaaagaagaggaatagaaggaaaataccactttgcatgagaaaatagaaa 443
Query: 244 agatactttgaaggtgtgccagggattggatagatcccaaccaccagaaatttcagggtg 303
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agatactttgaaggcatgccagggattggatagatcccaaccaccagaaatttcagggtg 503
Query: 304 taaagttgtaagattgtgaactcatttgaaagagagacctttggggtagattgctctcac 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaagttgtaagattatgaactcatttgaaagagagacctttggggtagattgctctcac 563
Query: 364 agggtcatagaaggaaatgctttactgatcttagctgcctaggggggcaaaagcagaatg 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agggtcatagagggaaatgctttactgatcttagctgcctaggggggcaaaagcagaatg 623
Query: 424 ctatgacactggatatgaagtgtccttaggaatggctcatatagtaaaaaaaaggttgct 483
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 624 ctatgacactggatatgaagtgtccttaggaagggctcatatagtaaaaaaaaggttgct 683
Query: 484 tgaacacactggtaatgatagtactcaaggtggtggcaggagagtcacagggtcaagtcc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 684 tgaacacactggtaatgatagtactcaaggtggtggcaggagagtcacagggttaagtcc 743
Query: 544 agcttttctcactatccctacttgcaaagtaatggctggtccccattttgggatgttctg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agcttttctcactatccctacttgcaaagtaatggctggtccccattttgggatgttctg 803
Query: 604 aaaactaaaggaggtgagccccagctggcggaagtaggtccttggcgatatatccctgca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaaactaaaggaggtgagccccagctggcggaagtaggtccttggcgatatatccctgca 863
Query: 664 cccttcctgcctgtctctcctta 686
|||||||||||||||||||||||
Sbjct: 864 cccttcctgcctgtctctcctta 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_g10.g1 MSMg01no297_g10.g1 CHROMAT_FILE:
MSMg01no297_g10.g1 PHD_FILE: MSMg01no297_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:50 2005
(654 letters)
>mm_chr7_97339085_97340139
Length = 1055
Score = 920 bits (476), Expect = 0.0
Identities = 491/496 (98%), Gaps = 1/496 (0%)
Strand = Plus / Minus
Query: 1 tctcccttctctccttgtttgctcac-gcaagttttcccaggacatgggaaatgccctca 59
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 496 tctcccttctctccttgtttgctcactgcaagttttcccaggacatgggaaatgccctca 437
Query: 60 cgtggaaagaaaaatctgccacctttaactgaacttaacagaaactgtgtgtctaaaatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cgtggaaagaaaaatctgccacctttaactgaacttaacagaaactgtgtgtctaaaatt 377
Query: 120 taataacaaaattatacccaaatttaagggggtgataataaagcgctataaaaggggagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 taataacaaaattatacccaaatttaagggggtgataataaagcgctataaaaggggagg 317
Query: 180 gggacgtctctccctattccagcaaattttttctaaacactttaggataaagtccttttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gggacgtctctccctattccagcaaattttttctaaacactttaggataaagtccttttt 257
Query: 240 tatgttgaaaaagaatattttataatgtcttatattggagctgaagaaatggctgaacag 299
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 256 tatgttgagaaagaatattttataatgtcttatattggagctgaagaaatggctgagcag 197
Query: 300 ttctcagtacgcatgtcaggtgggaagcacctgtaacttgagcccagggtgtccagtgtc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ttctcagtacgcatgtcaggtgggaagcacctgtaacttgagcccagggtgtccagtgtc 137
Query: 360 tctggcctctgcaggtacctgcactcatgtgtacatacgtacccacctccagacacataa 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 136 tctggcctctgcaggtacctgcactcatgtgtacatacctacccacctccagacacataa 77
Query: 420 ttttaaaaaattaaatcttttaacttaaaaaataacaactaaaaatcgtttttgacaggt 479
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 tttaaaaaaattaaatcttttaacttaaaaaataacaactaaaaatcgtttttgacaggt 17
Query: 480 ccttactgcacagcgc 495
||||||||||||||||
Sbjct: 16 ccttactgcacagcgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
