Query= MSMg01no302_p06.b1 MSMg01no302_p06.b1 CHROMAT_FILE:
MSMg01no302_p06.b1 PHD_FILE: MSMg01no302_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:43 2005
(297 letters)
>mm_chr7_36268920_36269616
Length = 697
Score = 530 bits (274), Expect = e-155
Identities = 289/294 (98%)
Strand = Plus / Minus
Query: 4 ggaattcactttgtatcccaggctggcctcgaactcagaaatccacctgcctctgcctcc 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ggaattcactttgtagaccaggctggcctcgaactcagaaatccacctgcctctgcctcc 529
Query: 64 cgaggattaaaggcgtgcaccaccacgcccgccatgtttctacttttagttaatgggcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cgaggattaaaggcgtgcaccaccacgcccgccatgtttctacttttagttaatgggcct 469
Query: 124 gtggcagtttgcaggtggggcgtgctgctctgaactttatcttgtatgtctttttaggga 183
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 468 gtggcagtttgcaggtggggcgtgctgctctgaactttctcttgtatgtctttttaggga 409
Query: 184 atatgtgtgcagtcttttgtgtaacatagtgaaagagaggcttgtatcttagaggttaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atatgtgtgcagtcttttgtgtaacatagtgaaagagaggcttgtatcttagaggttaat 349
Query: 244 tggtctttgttgtagattattgtgatgtgtggttctggagagatggcccagcag 297
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 348 tggtctttgttgtagattattgtgatgtgtggggctggagagatggcccagcag 295
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_p06.g1 MSMg01no302_p06.g1 CHROMAT_FILE:
MSMg01no302_p06.g1 PHD_FILE: MSMg01no302_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:43 2005
(454 letters)
>mm_chr7_36118259_36119109
Length = 851
Score = 832 bits (430), Expect = 0.0
Identities = 447/454 (98%), Gaps = 3/454 (0%)
Strand = Plus / Plus
Query: 1 ctgtgcacaaagcctgctcagtaggtggccccctctcccgacgacttctgctacccaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtgcacaaagcctgctcagtaggtggccccctctcccgacgacttctgctacccaagc 260
Query: 61 gctcggaggcctcctctcctgcaaacagctttccgtccttcctggccagagcctttaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctcggaggcctcctctcctgcaaacagctttccgtccttcctggccagagcctttaaaa 320
Query: 121 gcttccgagcagcgaatgaactggtcatgaatgtccgcgtccctgagtgggaaagcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttccgagcagcgaatgaactggtcatgaatgtccgcgtccctgagtgggaaagcaaac 380
Query: 181 gtatttagttctctgcatttactattcctagggctccagagaaagggcgaatttgggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatttagttctctgcatttactattcctagggctccagagaaagggcgaatttgggttt 440
Query: 241 cgctacttttgctgaaaccccgatcccgctggctgcgccaccttaacttagctcacaagg 300
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 cgctacgtttgctgaaaccccgatcccgctggctgcgccaccttaac---gctcacaagg 497
Query: 301 tagtgagctgtgaacaacactcagattaagatcgaaggccccccaagagctccattctag 360
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 498 tagtgagctgtgaacaacactcagattaagatcgaaggctcagcaagagctccattctag 557
Query: 361 actcgcggcagacagcacttaacacttgcatggggcaggggcgcggtctatacaatcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 actcgcggcagacagcacttaacacttgcatggggcaggggcgcggtctatacaatcaag 617
Query: 421 ggcagggcttcagggctctggcttcagcctcggg 454
||||||||||||||||||||||||||||||||||
Sbjct: 618 ggcagggcttcagggctctggcttcagcctcggg 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 851
Length adjustment: 10
Effective length of query: 444
Effective length of database: 841
Effective search space: 373404
Effective search space used: 373404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
