Query= MSMg01no304_e02.b1 MSMg01no304_e02.b1 CHROMAT_FILE:
MSMg01no304_e02.b1 PHD_FILE: MSMg01no304_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:38 2005
(760 letters)
>mm_chr7_125119049_125120208
Length = 1160
Score = 1104 bits (571), Expect = 0.0
Identities = 608/637 (95%), Gaps = 28/637 (4%)
Strand = Plus / Plus
Query: 1 aaaaataaagtgaggagtggttgaggaagacacccttta---ttgacctctgacccctat 57
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 201 aaaaataaagtgaggagtggttgaggaagacacc---taagattgacctctgacccctat 257
Query: 58 acataaatatagacatacacatgcactcacacatagtaataatgacagttgaaaaatctt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 acataaatatagacatacacatgcactcacacatagtaataatgacagttgaaaaatctt 317
Query: 118 gcaaatacgtcaaggacttatacaactttaatcatgacttatttacttacattgccacta 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcaaatacgtcaaggacttatacaactttaatcatgacttatttacttacattgccacta 377
Query: 178 aaaatacaaagccatgtgctataatcagacttgctttaaaggtggaatcctgcagttcag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaaatacaaagccatgtgctataatcagacttgctttaaaggtggaatcctgcagttcag 437
Query: 238 ggtcatgagccaaagatgaatattagtcatgtggcttaagatgcctttctcatttcccta 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggtcatgagccaaagatgaatattagtcatgtggcttaagatgcctttctcatttcccta 497
Query: 298 atgcttcagtttagccataggtaaaatgggaacagctagactcgatttgcaaggccacca 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atgcttcagtttagccataggtaaaatgggaacagctagactcgatttgcaaggccacca 557
Query: 358 tcagtattaatgctagtccttgtcacctcttaagcagagtggcagtgagtgctgactatt 417
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tgagtattaatgctagtccttgtcacctcttaagcagagtggcagtgagtgctgactatt 617
Query: 418 gccataacaggacctggagtcacctagaaaaaaagctttcaggaattatcttgtcctgtt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gccataacaggacctggagtcacctagaaaaaaagctttcaggaattatcttgtcctgtt 677
Query: 478 aactgaagtgagacttattctgtactctagtgtcctgaacttgctggataaaacagagga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aactgaagtgagacttattctgtactctagtgtcctgaacttgctggataaaacagagga 737
Query: 538 aactagctagctgtgtatcagtatctctctctctctctctctctctcacacacacacaca 597
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 aactagctagctgtgtatcagtatctctctctctctctctctctctc------------- 784
Query: 598 cactctctctctctctctctctctcacacacacacac 634
||||||||||||||||||||||||||||
Sbjct: 785 ---------tctctctctctctctcacacacacacac 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 85
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 760
Length of database: 1160
Length adjustment: 10
Effective length of query: 750
Effective length of database: 1150
Effective search space: 862500
Effective search space used: 862500
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no304_e02.g1 MSMg01no304_e02.g1 CHROMAT_FILE:
MSMg01no304_e02.g1 PHD_FILE: MSMg01no304_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:38 2005
(646 letters)
>mm_chr7_125183027_125184072
Length = 1046
Score = 607 bits (314), Expect = e-178
Identities = 362/378 (95%)
Strand = Plus / Minus
Query: 1 ctcctcaactctttttcttccacttgaccattggctaaagaggctcccagaatccagggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctcctcaactctttttcttccacttgaccattggctaaagaggctcccagaatccagggc 319
Query: 61 atctctctactcaatgtttaactacttgtttaaaaggatgctacaaagaatacaggcgaa 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 318 atctctccactcaatgtttaactacttgtttaaaaggatgctacaaagaatacaggctaa 259
Query: 121 ctcagccctcaagaaagatgataagtgtggaggtcatgtgatgttcccacctgtggcagg 180
||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 258 ctcagccctcaaggaagatgacaagtatggaggtcatgtgatgttcccacctgtggcagg 199
Query: 181 accttcccctaatgaataaagatttcagtggaccaatcactgggctggacttccagattg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 198 accttcccctaatgaataaagatttcagtggaccaatcactgggctggatttccagattg 139
Query: 241 gagagaggaagaggggaaggaggagaaagagactggcttttggatgggagacaggtggaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gagagaggaagaggggaaggaggagaaagagactggcttttggatgggagacaggtggag 79
Query: 301 gtcaggatgtaggtagtggcaacctccgttttgggtggtggatccattgggatccactac 360
||||||||||||||||||| ||||||| ||| ||||||||||| ||||||||| ||||
Sbjct: 78 gtcaggatgtaggtagtggtgacctccggtttaggtggtggatctgttgggatccgctac 19
Query: 361 tggaggattcaacttaga 378
||||||||| |||||||
Sbjct: 18 cggaggattcgacttaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
