Query= MSMg01no308_f08.b1 MSMg01no308_f08.b1 CHROMAT_FILE:
MSMg01no308_f08.b1 PHD_FILE: MSMg01no308_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:37 2005
(123 letters)
>mm_chr7_147076213_147076734
Length = 522
Score = 176 bits (91), Expect = 4e-49
Identities = 115/123 (93%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 1 gagagctatcttgtttatttctcactgcacttgatttggctaatcctatagtcattaact 60
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 321 gagagctctcttgtttatttctcactgcacttgatttggctaagcctatagtcatgaact 262
Query: 61 ggaaggtctgcatgtatgcgtgtgttaattgtcattatctcccccc-ataagaatgcccg 119
|||||||||||||| |||||||||||||||||||| || ||||||| | |||||||||||
Sbjct: 261 ggaaggtctgcatg-atgcgtgtgttaattgtcataat-tcccccccacaagaatgcccg 204
Query: 120 atg 122
|||
Sbjct: 203 atg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 123
Length of database: 522
Length adjustment: 8
Effective length of query: 115
Effective length of database: 514
Effective search space: 59110
Effective search space used: 59110
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no308_f08.g1 MSMg01no308_f08.g1 CHROMAT_FILE:
MSMg01no308_f08.g1 PHD_FILE: MSMg01no308_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:38 2005
(243 letters)
>mm_chr7_146903923_146904565
Length = 643
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%)
Strand = Plus / Plus
Query: 1 aaaggagaggagacatatatgggatgacccagaactttttattggacccttttcgtccca 60
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 201 aaaggagaggagacatatatgggatgacccagaactttttagtggacctttttcgtccca 260
Query: 61 gtgactcagatcaacaggtgagacaaatgaccattctcaaggttccggatgtgagatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgactcagatcaacaggtgagacaaatgaccattctcaaggttccggatgtgagatgat 320
Query: 121 attcaacacaacaggagctccttctctgaaggagtcgtgagattgtggccttcacacccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcaacacaacaggagctccttctctgaaggagtcgtgagattgtggccttcacacccc 380
Query: 181 tgtatcgtggggatacgtgatagtcttggcaggaatgccaacttctgtccatctggtgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtatcgtggggatacgtgatagtcttggcaggaatgccaacttctgtccatctggtgtc 440
Query: 241 tgc 243
|||
Sbjct: 441 tgc 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
