CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCAAAATATTCCGAAAGCTAAAACAATCCTAGGCATGAAAGTAAG
AGCAGATGAATCACAGTGACATACAAACAAGTATTGTATAGCACTAAAAC
AGAAAATGGAAGAATTCTGAAGCCAGTTAAAATTCAGACTCTTTTACAGT
CTCTGACTAATTGCACTCTCAGTGTCTTAGATTGGGTTTTACTGCTGTGA
ACAGACACCATGACCAAGGTACATCTTATAAAGGAGCCATTTAACCAAGG
GTAGCTTACAGGTTCAGAGTTTCAGTCAAGTATCATCAAGGCAGGAACAT
GGCAGGAATGGTAGAGGAGTTGCTGAGAGTTCTACATCTTTATATGAACG
TTGCTAGCAAAACACCGGCTTCCAGGTAGCTAGGATAAGGGTTTTATATC
ACCAACACACCTACTCCAACAGGGCCAAACTTTACAATAATGCCACTCTG
TGTGCTGAGTATATGAAAACACGACAATCAGGAAATTCTCACTCTCTCTC
TCTTTCTTTTTAAATACAAGACAATGGAATTTACACAGAATCAGATTAAG
TTATATTCTCCACTTTTATGTATTTACTAATTGATGATAAGTCCTTGTAC
ATTGCTTTTTGCTGTTCTCCCCACCTTGTGTTTGGTG

TTTTTGGTTGTTTTTTTTTTTTTTTTTTTCANNNNNNNNNNNNNNNNNNN
NCCTCTATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGCCCCA
TTTTTAATGCGGTTATTTGATGGATACTTCAATGCATCTTAGAAGTTGGG
AACAAAAGAGCGATGGAAGTAGTTACAGAGACAAAATGTGGAATGGAGAC
TGAAGAAATGACCATCCAGAGACTGATTTACCTGGGGATCCATCTGTGAT
GGTTTGTATATTCTTGGACCAGGGAGTGGCACCATTTGGAATTGTGGCCT
TGTTGGAATAGGTGTGACCTGGTTGGAGTAGGTGTGTCACTGTGGTTTTG
GGCATAAGATCCTCACCTTAGTTTCCTGGAAGTCAGTCTTCCACTAGTAG
CCTTTGGATGAAGATGTAGAACTCTCAGCTCCTCCTGCACCATGCCTGCC
TGAATGGTGCCATGCTCCCACCTTTATGGTAATGAATTGAACCTCTGAAT
CTATAAGCCGGCCCCAATTAAATGTTGGTTTTTGATAAGACTTGCCTTGG
TCATGGTTTATGTTCACATCCATAAAACCCTAACTAATATACCACCTCAT
ATACAATCACCAAACCCCGACACTGTTGTGGATGCCAACAACTGCTTACT
GAGAGGAGCCTGATATAGCTCTCTCCTGACAGGCTCTGCCAGAACCTACC
AAATACATAAGTGGATCCTCACAGCCATGCC

Query= MSMg01no309_e02.b1 MSMg01no309_e02.b1 CHROMAT_FILE:
MSMg01no309_e02.b1 PHD_FILE: MSMg01no309_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:47 2005
         (641 letters)



>mm_chr7_60673101_60674141
          Length = 1041

 Score =  681 bits (352), Expect = 0.0
 Identities = 371/378 (98%), Gaps = 4/378 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaaaatattc-c-gaaagctaaaacaatcctaggcatgaaagtaagagcagatg 62
           |||||||||||||  | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaattccaaaata--cacagaaagctaaaacaatcctaggcatgaaagtaagagcagatg 319

                                                                       
Query: 63  aatcacagtgacatacaaacaagtattgtatagcactaaaacagaaaatggaagaattct 122
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aatcacagtgacatagaaacaagtattgtatagcactaaaacagaaaatggaagaattct 259

                                                                       
Query: 123 gaagccagttaaaattcagactcttttacagtctctgactaattgcactctcagtgtctt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gaagccagttaaaattcagactcttttacagtctctgactaattgcactctcagtgtctt 199

                                                                       
Query: 183 agattgggttttactgctgtgaacagacaccatgaccaaggtacatcttataaaggagcc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 agattgggttttactgctgtgaacagacaccatgaccaaggtacatcttataaaggagcc 139

                                                                       
Query: 243 atttaaccaagggtagcttacaggttcagagtttcagtcaagtatcatcaaggcaggaac 302
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atttaaccaggggtagcttacaggttcagagtttcagtcaagtatcatcaaggcaggaac 79

                                                                       
Query: 303 atggcaggaatggtagaggagttgctgagagttctacatctttatatgaacgttgctagc 362
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 78  atggcaggaatggtagaggagttgctgagagttctacatctttatatgaatgttgctagc 19

                             
Query: 363 aaaacaccggcttccagg 380
           ||||||||||||||||||
Sbjct: 18  aaaacaccggcttccagg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)