Query= MSMg01no311_c03.b1 MSMg01no311_c03.b1 CHROMAT_FILE:
MSMg01no311_c03.b1 PHD_FILE: MSMg01no311_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:54 2005
(371 letters)
>mm_chr7_141223283_141224053
Length = 771
Score = 658 bits (340), Expect = 0.0
Identities = 361/368 (98%)
Strand = Plus / Plus
Query: 4 ggaattccacggggccaagtgtcgggtgatgaagcccgacaggtctaggaacatcagagg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacggggccaagtgtcgggtgatgaagcccgacaggtctaggaacatcagagg 263
Query: 64 tgggcgaaatagtctctcctggtgtctgcaaggtcagtggacaaaactgtgtcatgaaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgggcgaaatagtctctcctggtgtctgcaaggtcagtggacaaaactgtgtcatgaaaa 323
Query: 124 ctgacatttggtgtgttgtgtaagcactaagcaacttagcatcagtaatgcctgtcctgt 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgacatttggtgtgttgcgtaagcactaagcaacttagcatcagtaatgcctgtcctgt 383
Query: 184 cccctataacgacagatggctttcacaatgggttaggtcaccatggtcccaggtcttggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cccctataacgacagatggctttcacaatgggttaggtcaccatggtcccaggtcttggg 443
Query: 244 tcagaaaactgggagtttcatcaaaaaacagaccatgccttgagttagctcagctaagac 303
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcagagaactgggaggttcatcaaaaaacagaccatgccttgagttagctcagctaagac 503
Query: 304 ctcaagcacacacagctgtatattgctccaaagtaaagaatgccagttgggagatggctg 363
|||||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||
Sbjct: 504 ctcaagcacacacagctgcagattgcttcaaagaaaagaatgccagttgggagatggctg 563
Query: 364 ggtttgga 371
||||||||
Sbjct: 564 ggtttgga 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_c03.g1 MSMg01no311_c03.g1 CHROMAT_FILE:
MSMg01no311_c03.g1 PHD_FILE: MSMg01no311_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:54 2005
(501 letters)
>mm_chr7_141375847_141376748
Length = 902
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 189 gaagaagtccatcagttgaggcatttgtaaccttctcttcactttctgttccccctctct 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 gaagaagtccatcagttgaggcatttgtaaccttctcttcactttctgttccccctctct 843
Query: 249 gcttcccatgtgcagatgagatatgctcagccagcttaccgctcctgttgccatgccatt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gcttcccatgtgcagatgagatatgctcagccagcttaccgctcctgttgccatgccatt 783
Query: 309 atgaatgtcccctctggaaccacaagccaaaataaagccccctacactctgccttggtca 368
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 782 atgaatgtcccctctggaaccacaagccaaaataaagccttctacactctgccttggtca 723
Query: 369 tagcattctttcatagcaactactacagcatacaagcaaaaaatacctggtggcttcaat 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tagcattctttcatagcaactactacagcatacaagcaaaaaatacctggtggcttcaat 663
Query: 429 aaacctatgt-aaaaaaaaatgccaaaatgagggcatacttgtaatcctggcaccagaga 487
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aaacctatgtaaaaaaaaaatgccaaaatgagggcatacttgtaatcctggcaccagaga 603
Query: 488 ggctcataacctca 501
||||||||||||||
Sbjct: 602 ggctcataacctca 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 902
Length adjustment: 10
Effective length of query: 491
Effective length of database: 892
Effective search space: 437972
Effective search space used: 437972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
