Query= MSMg01no311_m19.b1 MSMg01no311_m19.b1 CHROMAT_FILE:
MSMg01no311_m19.b1 PHD_FILE: MSMg01no311_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:45 2005
(244 letters)
>mm_chr7_85245548_85246191
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Minus
Query: 1 agaactccactattttgtataacagagaagtcaaaagaggaagaacaacttatctagaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 444 agaactccactattttgtataacagagaagtcaaaagaggaagaacaacttatccagaat 385
Query: 61 cacacagtcagatgttatccaaaggtagactataacctggggtttccaaagtccagctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cacacagtcagatgttatccaaaggtagactataacctggggtttccaaagtccagctac 325
Query: 121 cctgttgacatatagtcttccattattaccagtcaatggtcagtggtcttacgggagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctgttgacatatagtcttccattattaccagtcaatggtcagtggtcttacgggagtga 265
Query: 181 gtgggataaaaaacttacagcctcaaggccaaatttattatatagtttatcttgaacttg 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtgggataaaaaatttacagcctcaaggccaaatttattatatagtttatcttgaacttg 205
Query: 241 acta 244
||||
Sbjct: 204 acta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no311_m19.g1 MSMg01no311_m19.g1 CHROMAT_FILE:
MSMg01no311_m19.g1 PHD_FILE: MSMg01no311_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:45 2005
(244 letters)
>mm_chr7_85185088_85185730
Length = 643
Score = 443 bits (229), Expect = e-129
Identities = 240/244 (98%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 1 actgtacctctgatgcccattctgaattttgttacagtgtttcattaaaggttaaacact 60
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgcctccgatgcccattctgaattttgttacagtgtttcattaaaggttaaacact 260
Query: 61 cctagtgccttgataacctgctattagcaatcttgaccaactcataagcattcctgcagt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 cctagtgccttgataacctgctattagcaatcttgaccaa-tcataagcattcctgcagt 319
Query: 121 gaaatgcttagaaaatttacccaactcaacaataataaaaatagtccacaaactgagtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaaatgcttagaaaatttacccaactcaacaataataaaaatagtccacaaactgagtgc 379
Query: 181 tacaaaatgaaactcctgtataanatttgcaccctcaatgacctaaatgcaggagacttc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 380 tacaaaatgaaactcctgtataaaatttgcaccctcaatgacctaaatgcaggagacttc 439
Query: 241 taat 244
||||
Sbjct: 440 taat 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
