Query= MSMg01no313_d05.b1 MSMg01no313_d05.b1 CHROMAT_FILE:
MSMg01no313_d05.b1 PHD_FILE: MSMg01no313_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:37 2005
(321 letters)
>mm_chr7_74455366_74456087
Length = 722
Score = 594 bits (307), Expect = e-174
Identities = 318/322 (98%), Gaps = 1/322 (0%)
Strand = Plus / Plus
Query: 1 ttaaaattagttactattgcttgtctactactctacaagaatgggctaaatggatcgggt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 ttaaaattagttactattgcttgtctactactctacaagaatgggctaaatggaaagggt 260
Query: 61 aattccaagaactagtacagacttgaagtagctagaatcacactgctagctaaatataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattccaagaactagtacagacttgaagtagctagaatcacactgctagctaaatataaa 320
Query: 121 ttaggcacaaacacgttagaaagctcttgtcaaatcaggtaactacagaggttaagtact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaggcacaaacacgttagaaagctcttgtcaaatcaggtaactacagaggttaagtact 380
Query: 181 tcgggtaagggaccagggtggaggaggagacctctcaaggaaggggaaaaagaacagtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcgggtaagggaccagggtggaggaggagacctctcaaggaaggggaaaaagaacagtct 440
Query: 241 caagaagagatcaagaggatactagaatagctttggggggggggg-taaaggaggaaata 299
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 caagaagagatcaagaggatactagaatagctttggggggggggggtaaaggaggaaata 500
Query: 300 tggggaggacaantcacactaa 321
|||||||||||| |||||||||
Sbjct: 501 tggggaggacaactcacactaa 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 722
Length adjustment: 9
Effective length of query: 312
Effective length of database: 713
Effective search space: 222456
Effective search space used: 222456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_d05.g1 MSMg01no313_d05.g1 CHROMAT_FILE:
MSMg01no313_d05.g1 PHD_FILE: MSMg01no313_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:37 2005
(313 letters)
>mm_chr7_74581032_74581744
Length = 713
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%)
Strand = Plus / Minus
Query: 1 aggaaggctgggatcgaagaagtggcgggcagcagctaagtccatggagaaggggagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aggaaggctgggatcgaagaagtggcgggcagcagctaagtccatggagaaggggagagg 454
Query: 61 ccaagggctccaggagggaaggatttggggaaagagaggctctattttgtctttgccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccaagggctccaggagggaaggatttggggaaagagaggctctattttgtctttgccatc 394
Query: 121 ttgtcctttctgctatgagggcaggaggaaaggaaaagaggggccgacaggagtgtcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ttgtcctttctgctatgagggcaggaggaaaggaaaagaggggccgacaggagtgtcaca 334
Query: 181 gggtccaggagcatgctggtgcctgagatttctgggatatgtgagtgaagaagaccccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gggtccaggagcatgctggtgcctgagatttctgggatatgtgagtgaagaagaccccac 274
Query: 241 ctctgacttaatctctgcctgttgaactgtactgcttcccactctacagtaatcccggcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 273 ctctgacttaatctctgcctgttgaactgtactgcttcccactctacagtaatcccgtcc 214
Query: 301 tggaccatgtgag 313
|||||||||||||
Sbjct: 213 tggaccatgtgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
