Query= MSMg01no315_j09.b1 MSMg01no315_j09.b1 CHROMAT_FILE:
MSMg01no315_j09.b1 PHD_FILE: MSMg01no315_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:06 2005
(372 letters)
>mm_chr7_84958756_84959527
Length = 772
Score = 625 bits (323), Expect = 0.0
Identities = 356/367 (97%)
Strand = Plus / Plus
Query: 4 gaattcatttaaaattcccaaatattcataggtattgtagttctccaatctctatacaaa 63
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcatttaaaaatgacaaatattcataggtattgtagttctccaatctctatacaaa 263
Query: 64 atttatcaaattatgagtactattttaactcaatttcattcccatagacacaccagtatt 123
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atttatcaacttatgagtactattttaactcaatttcattcccatagacacaccagtatt 323
Query: 124 ttagttagtttcttggtcaaccatgatatattagtagtaaacacctatatgatcagaaaa 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 ttagttagtttcttggtcaaccatgatatattagtagtaagcacctatatgatcagaaaa 383
Query: 184 ttaatccaccactaaattgccccacaagttacttaacgtgaaggccatgtcaaagtttcg 243
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 384 ttaatccaccactaaattgccccacaagttacttcacatgaaggccatgtcaaagtttcg 443
Query: 244 tacaaatatacaacctaatattgctgccacagcatccattgtagtctgcagtgacttaaa 303
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 444 tacaaatatacaacctaatattgctgccacagcaaccattgtagtctgcagtgaattaaa 503
Query: 304 ccaacttctacttgatagaataccccatagcaagagaaccttatcatgaataacaggctc 363
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 504 ccaacttctatttgatagaataccccatagcaagagaactttatcatgaataacaggctc 563
Query: 364 ctgtcat 370
|||||||
Sbjct: 564 ctgtcat 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_j09.g1 MSMg01no315_j09.g1 CHROMAT_FILE:
MSMg01no315_j09.g1 PHD_FILE: MSMg01no315_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:06 2005
(342 letters)
>mm_chr7_85137605_85138345
Length = 741
Score = 607 bits (314), Expect = e-178
Identities = 335/342 (97%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 1 aaatggaaatatcttttgtgaccagagttgcagattcccagactcacatgcaggaggtat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaatggaaatatcttttgtgaccagagttgcagattcccagactcacatgcaggaggtaa 482
Query: 61 taaatacttgtaatagtttcaaatggggtttggagtggttccaggagcatgactgaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taaatacttgtaatagtttcaaatggggtttggagtggttccaggagcatgactgaaatc 422
Query: 121 acagaaagtctagggttgttgttggtgtggcaaattcaggagtggaaccaccatttgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acagaaagtctagggttgttgttggtgtggcaaattcaggagtggaaccaccatttgcta 362
Query: 181 agctgccagggatctcacctgagctaggagatccttaaaagaagctttcgtgctacatca 240
|||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||
Sbjct: 361 agctgccagggatctcacctgagctaggagatccttaaaagaggcttttgtgttacatca 302
Query: 241 cagtgcggtttgactctgtgttgtcaccatagatagttactcacacccatacttaatcca 300
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagtgcggct-gactctgtgttgtcaccatagatagttactcacacccatacttaatcca 243
Query: 301 actatttctgggaagtccttacattgtatagaagttaagagc 342
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 242 actatttctgggaagtccttatattgtatagaagttaagagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 741
Length adjustment: 9
Effective length of query: 333
Effective length of database: 732
Effective search space: 243756
Effective search space used: 243756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
