Query= MSMg01no316_l12.b1 MSMg01no316_l12.b1 CHROMAT_FILE:
MSMg01no316_l12.b1 PHD_FILE: MSMg01no316_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:32 2005
(583 letters)
>mm_chr7_30065094_30066077
Length = 984
Score = 1075 bits (556), Expect = 0.0
Identities = 574/580 (98%), Gaps = 1/580 (0%)
Strand = Plus / Minus
Query: 5 gaattcattgattgaccaaacttaattgagtccccgctgagggtctgtaagaatggtggt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gaattcattgattgagcaaacttaattgagtccccgctgagggtctgtaagaatggtggt 725
Query: 65 cgtggctgactcacgactagacaggttcctgaattcgcagagcttggattccagtgggag 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cgtggctgactcaagactagacaggttcctgaattcgcagagcttggattccagtgggag 665
Query: 125 cgaacacttaacgtgcagagtactcgccaaagattaaatgactagcggtgactagaagac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cgaacacttaacgtgcagagtactcgccaaagattaaatgactagcggtgactagaagac 605
Query: 185 agcgggataagaacagtgatagaagatggtgaagggtacttaactcaggaagtactctaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agcgggataagaacagtgatagaagatggtgaagggtacttaactcaggaagtactctaa 545
Query: 245 ggagggtggcacctatcctaacaattgaatgagtaggtggcagccatactaagaccttgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ggagggtggcacctatcctaacaattgaatgagtaggtggcagccatactaagaccttgg 485
Query: 305 gaccagtgtcccaggtagtgggagggagtagtgagggtctagagtaaaattgattgtgat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaccagtgtcccaggtagtgggagggagtagtgagggtctagagtaaaattgattgtgat 425
Query: 365 caaggaaaacaccccacccccaccccaaggctggaacagaagtcaggaaggggagaagtg 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 caaggaaaagaccccacccccaccccaaggctggaacagaagtcaggaaggggagaagtg 365
Query: 425 gacatagccacgaggcc-aagtccttagtgggcaagctatttggtgaaagagaaagcagg 483
|||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 364 gacacagccacgaggcccaagtccttagtgggcaacctatttggtgaaagagaaagcagg 305
Query: 484 gagtgtggtagcttctgaggaatggtctattcctgtgtctaagactagggcaacaacaag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gagtgtggtagcttctgaggaatggtctattcctgtgtctaagactagggcaacaacaag 245
Query: 544 agttatggagaatgccacaggccggtgggagaggctcagc 583
||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agttatggagaatgccacaggccggtgggagaggctcagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 984
Length adjustment: 10
Effective length of query: 573
Effective length of database: 974
Effective search space: 558102
Effective search space used: 558102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_l12.g1 MSMg01no316_l12.g1 CHROMAT_FILE:
MSMg01no316_l12.g1 PHD_FILE: MSMg01no316_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:32 2005
(139 letters)
>mm_chr7_29892804_29893342
Length = 539
Score = 221 bits (114), Expect = 2e-62
Identities = 130/136 (95%), Gaps = 4/136 (2%)
Strand = Plus / Plus
Query: 1 cagatgatccctgaaagtcattcctatttttacattttgagacaatgtgcgtgttacgta 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 201 cagatgatccctgaaagtcattcctatttttacattttgagacaatgtgtgtgttatgta 260
Query: 61 tttgttcatgcacaagtgtgcattcttgtgcctgtggagaccaaaggtcaacttcggggg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 tttgttcatgcacaagtgtgcattcttgtgcctgtggagaccaaaggtcaactt-ggggg 319
Query: 121 ggggtggt--gggggg 134
|||| ||| ||||||
Sbjct: 320 gggg-ggttagggggg 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 539
Length adjustment: 8
Effective length of query: 131
Effective length of database: 531
Effective search space: 69561
Effective search space used: 69561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
