Query= MSMg01no317_k01.b1 MSMg01no317_k01.b1 CHROMAT_FILE:
MSMg01no317_k01.b1 PHD_FILE: MSMg01no317_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:39 2005
(237 letters)
>mm_chr7_123509025_123509660
Length = 636
Score = 406 bits (210), Expect = e-118
Identities = 229/240 (95%), Gaps = 9/240 (3%)
Strand = Plus / Minus
Query: 1 tgaggcaaagattgggggcataggactatgtggaccagtacatgcgggcccagggcagta 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 435 tgaggcaaagattgggggcatagggctatgtggaccagtacatgcgggcccagggcagta 376
Query: 61 ggtgagagatcctactccttcagatctcaggataagaattctggggtttgaacatgcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggtgagagatcctactccttcagatctcaggataagaattctggggtttgaacatgcttg 316
Query: 121 accccactcacagcctgctttcccagtcccaaggcttcctgacctggcaatacagatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 accccactcacagcctgctttcccagtcccaaggcttcctgacctggcaatacagatgct 256
Query: 181 tgtctgtaggagaattatttttg----attcctgtcttagttaaggttactattgctgta 236
||||| ||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 255 tgtctataggagaatta-----ggaagattcctgtcttagttaaggttactattgctgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 636
Length adjustment: 9
Effective length of query: 228
Effective length of database: 627
Effective search space: 142956
Effective search space used: 142956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_k01.g1 MSMg01no317_k01.g1 CHROMAT_FILE:
MSMg01no317_k01.g1 PHD_FILE: MSMg01no317_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:39 2005
(330 letters)
>mm_chr7_123338647_123339376
Length = 730
Score = 609 bits (315), Expect = e-179
Identities = 325/329 (98%), Gaps = 2/329 (0%)
Strand = Plus / Plus
Query: 1 actctgttctccaggcagaccttgcacctgagatcctcctgcctcaccctctcaagtaca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 actctgttctccaggcagaccttgcacctgagatcctcctgcctcagcctctcaagtaca 260
Query: 61 ctgtgattcctgccttgtaacaagcaggctcatcttttgtctcctggttagtagtcttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtgattcctgccttgtaacaagcaggctcatcttttgtctcctggttagtagtcttgg 320
Query: 121 taacagctcctaggcacgtcttttgcttcttctgtctcagcctctgtgacttcaccggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taacagctcctaggcacgtcttttgcttcttctgtctcagcctctgtgacttcaccggaa 380
Query: 181 gctctcgggtcttgtaaggtaagagagatcgtgacagcctcactacaccatgcacagtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctctcgggtcttgtaaggtaagagagatcgtgacagcctcactacaccatgcacagtga 440
Query: 241 aaatgtactccttgccttggcttataagatcctagaaggcaggctagggctatatagctc 300
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 aaatgcactccttgccttggcttataagatcctagaaggcaggctagggctata--gctc 498
Query: 301 agttggcacagtgcttgcccaacacccac 329
|||||||||||||||||||||||||||||
Sbjct: 499 agttggcacagtgcttgcccaacacccac 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
