Query= MSMg01no318_b03.b1 MSMg01no318_b03.b1 CHROMAT_FILE:
MSMg01no318_b03.b1 PHD_FILE: MSMg01no318_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:10 2005
(215 letters)
>mm_chr7_124448091_124448703
Length = 613
Score = 387 bits (200), Expect = e-112
Identities = 210/214 (98%), Gaps = 2/214 (0%)
Strand = Plus / Plus
Query: 1 caaagggcaggaggagaagcatctgagatggcacagtccaaggggacagagaaaataccc 60
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagggtagcaggagaagcatctgagatggcacagtccaaggggacagagaaaataccc 260
Query: 61 cttagggattggctgtcaggatattaagtttacagtgtcccaataccaagtatgattccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 --tagggattggctgtcaggatattaagtttacagtgtcccaataccaagtatgattccc 318
Query: 121 ttctaaaagtatacagcaaggtctgagggtgttggtcagtgggaggctgcttcctaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttctaaaagtatacagcaaggtctgagggtgttggtcagtgggaggctgcttcctaccac 378
Query: 181 actttcattggatttgatcctcaaatacagctaa 214
||||||||||||||||||||||||||||||||||
Sbjct: 379 actttcattggatttgatcctcaaatacagctaa 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 613
Length adjustment: 9
Effective length of query: 206
Effective length of database: 604
Effective search space: 124424
Effective search space used: 124424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no318_b03.g1 MSMg01no318_b03.g1 CHROMAT_FILE:
MSMg01no318_b03.g1 PHD_FILE: MSMg01no318_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:10 2005
(326 letters)
>mm_chr7_124607554_124608279
Length = 726
Score = 574 bits (297), Expect = e-168
Identities = 315/321 (98%)
Strand = Plus / Minus
Query: 6 actgtatgctaggctaaattaggacctggtgtattgtgctagtggccatcttatttgata 65
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 462 actgtatgctaggctaaattaggacctggtgtattgtgctagtggacatcttatttgata 403
Query: 66 tagctccgtctcatcctagccccagttacagtgaagccaccccagccctatggtggacat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tagctccgtctcatcctagccccagttacagtgaagccaccccagccctatggtggacat 343
Query: 126 cttcacagctaccattcattctgtggtccttgaaaggaactgcaatcagcaagtgacagc 185
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 342 cttcccagctaccattcattctgtggtccttgaaaggaaccgcaatcagcaagtgacagc 283
Query: 186 aatagaagtagacgcaacattttattacatcatcaatccactctcacagaacagttggga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aatagaagtagacgcaacattttattacatcatcaatccactctcacagaacagttggga 223
Query: 246 gacagaaggtttctcccggggctggggaggtggttcccttggtagaacattcgcttagca 305
||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||
Sbjct: 222 gacagaaggtttctcccggggctggggaggtggctcccctggtagaacattcacttagca 163
Query: 306 tgcatccctagcactgcacaa 326
|||||||||||||||||||||
Sbjct: 162 tgcatccctagcactgcacaa 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
